Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0948 ATGGAGGAAATTGAAGGGTTCAATTGTGGTGAAAGTAAGAGCCGCATTGATGGTGGTCGACCTCCGAATCCACCTTCTTCTTCTGCTGGTGCTGCACGAACTGACCCTGTCGTTCTGCCTTGCAAGAAATCCCTTATTCGCCACGCTTCTCTTCAGGTGAAGGCCAAGTTATCTGACATGGCTGCTGAGTCAGAACATGTTAGTGAAGATTGTCAGTCTGATTTCCTTCCAAATCTTCGTTCGGGAGCATGCGCTGATATTGGGATCCGGCCAAGTATGGAGGACGTTTATGTTTGTGTTGACAACTTTATGCAGGATAATGAGCTCAAGAACCATATAGATGAACCCAGTGCTTTCTACGGGCTATTTGATGGACATGGTGGAAAGCATGCCGCGGACTTTGCTTGCCATCATTTGCCAAAGTTCATTATCGAGGATGAAGATTTCCCAAGTGATGTTGAAAGGATAGTTGCTTCAGCATTTCTGCAAACGGATAATGCCTTTGCAAAAGCTTGCTCTCTGGATGCTACCCTTGCATCTGGCACCACTGCATTGGCTGCTCTTGTTATTGGAAGGTTGCTGGTGGTTGCAAATGCTGGAGATTGTCGAGCTGTGTTATGCCGTCGTGGAAAAGCAATCGAGATGTCAAGAGATCATAAACCGATGTGCGGCACAGAGAAGAAGCGTATTGAGGCATCTGGGGGTTATGTCTATGATGGATATCTTAATGGGCAGCTTAATGTTGCTCGTGCTATTGGTGACTGGCACATCGAAGGAATGAAAGGCAGAGATGGTGGACCACTCAGTGCAGAACCTGAGCTAATGACTACAAAACTTACCGTCGAGGATGAATTTCTCATCATTGGCTGTGATGGGATTTGGGAGGTATTTAGGAGCCAAAATGCAGTGGATTTTGCTCGGCGCAGGCTTCAGGAGCATAACGACCCAGCCATGTGTAGTAAGGATCTGGTTGACGAGGCTTTGAAGAGAAAGAGTGGAGACAATTTAGCTGCAGTTGTGGTTTGCTTCCAGCAGCATCCGCCGCCTAACTTGGTGGCGCAACGCCCTAGAGTGCACAGGAGCTTCTCTGCCGAAGGTTTGAGGGAGTTGCAAAGCTTCTTGGATAGCTTGGGTAATTGA 1140 0.4763 MEEIEGFNCGESKSRIDGGRPPNPPSSSAGAARTDPVVLPCKKSLIRHASLQVKAKLSDMAAESEHVSEDCQSDFLPNLRSGACADIGIRPSMEDVYVCVDNFMQDNELKNHIDEPSAFYGLFDGHGGKHAADFACHHLPKFIIEDEDFPSDVERIVASAFLQTDNAFAKACSLDATLASGTTALAALVIGRLLVVANAGDCRAVLCRRGKAIEMSRDHKPMCGTEKKRIEASGGYVYDGYLNGQLNVARAIGDWHIEGMKGRDGGPLSAEPELMTTKLTVEDEFLIIGCDGIWEVFRSQNAVDFARRRLQEHNDPAMCSKDLVDEALKRKSGDNLAAVVVCFQQHPPPNLVAQRPRVHRSFSAEGLRELQSFLDSLGN* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0948 379 SMART PP2C_4 70 341 IPR001932 -
Dod09g0948 379 Gene3D - 57 347 IPR036457 -
Dod09g0948 379 ProSitePatterns PPM-type phosphatase domain signature. 119 127 IPR000222 GO:0043169
Dod09g0948 379 Pfam Protein phosphatase 2C 83 335 IPR001932 -
Dod09g0948 379 MobiDBLite consensus disorder prediction 1 33 - -
Dod09g0948 379 PANTHER PROTEIN PHOSPHATASE 2C 27-RELATED 67 364 - -
Dod09g0948 379 SUPERFAMILY PP2C-like 74 345 IPR036457 -
Dod09g0948 379 CDD PP2Cc 80 343 IPR001932 -
Dod09g0948 379 ProSiteProfiles PPM-type phosphatase domain profile. 80 343 IPR001932 -
Dod09g0948 379 PANTHER PROTEIN PHOSPHATASE 2C 67 364 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0948 Dod-Chr9 29380213 29383122 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0948 1 379 PP2C-type Phosphatase Gene Family AT2G25620 66.412 0.0 523
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBP Dod09g0948 PP2C 2.2e-68 CL0238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0948 K14803 - gmx:100815725 605.134