Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0947 ATGGAAAGTGATGAACTGAGAGTTGCAAGTGCACGCGTAGGAAGCTCCAGCATCTGGAGAAGCGGCGCCGTTGATGTCTTTTCAGGCTCTTCAAGGAGGGAGGATGATGAGGAACAGCTTAAGTGGGCTGCAATTGAGAAGCTACCCACGTACCTACGCATGACAAGGGGTATACTCACTGAATCACAAGGCCAACCTGTGGAGATTGATATCAACAAACTTGGTCCCCTACAAAGGAAGAACTTGGTGGAGAGGCTGGTCAAGATTGCTGAGGAGGACAATGAGAAGTTCTTGTTGAAGCTAAGGGACCGCATTGATCGGGTTGGACTTGATATACCAACAATTGAAGTCCGGTTCGAGCACTTGAATGTTGAAGCTGAGGCCCATGTAGGAAGCAGGGCATTACCCACAATATTTAACTTCTGCATTAATTTGCTAGAGGGGTGCCTGAATTCTCTTCACCTTCTTCCCAGTCGAAAGAAGCCATTCACGGTTCTTCATGATGTTAGTGGAATCATCAAGCCTAGAAGAATGACACTGCTCTTAGGCCCTCCAAGCTCTGGGAAGACAACATTACTGTTGGCACTGGCTGGAAGACTTGGTAAAGATCTTAAATTTTCTGGTCGAGTTTCCTATAATGGTCATGGGATGGAGGATTTTGTGCCTCAGAGAACATCAGCTTACATTAGTCAAACTGATGTTCACATAGGGGAAATGACTGTCAGAGAAACATTGGCCTTTTCAGCAAGATGTCAAGGGATTGGAACCCGTTATGATATGCTGGCAGAATTATCAAGAAGAGAGAAGGCAGAAAACATTAAGCCAGATCCTGATCTTGATATTTATATGAAGGCTGCAGCTCTGGAAGGCCAAGAAACCAATGTAGTTACAGATTATATAATGAAGATTTTGGGACTAGAAGTATGTGCTGATACCGTGGTAGGGGATGACATGATTCGGGGTATTTCTGGTGGACAAAGAAAGAGAGTCACAACTGGTGAGATGCTAGTTGGGCCAGCAAGGGCACTTTTCATGGATGAAATATCAACTGGTTTGGACAGTTCCACCACATTCCAAATGGTCAATTCTCTGAGACAATCTATCCACATTCTGAATGGAACAGCTGTCATCTCTCTTCTCCAGCCAGCACCAGAAACTTATGAACTATTCGATGATATAATTCTGCTCTCAGATGGACAAATTGTCTATCAGGGTCCAAGGGAGAATGTTCTTGAGTTCTTTGAATTCATGGGCTTCAAATGTCCAGAAAGGAAAGGAGTAGCAGACTTCCTACAAGAAGTAACATCGAGGAAAGATCAAGAACAGTACTGGGCAAACAAAGATGAGCCATATACCTTTGTTTCTGTCAGAGAATTTGCTGATGCATTTCAGTCCTTTCACATTGGTAGAAAACTTGGTGATGAACTTGCTACTCCATTTGACAAGTCCAAAGGCCACCCTGCTGTTTTAACCAAGAACAAGTATGGTGTTTGCAAGAAGGAACTGTTGAAAGCTTGCGTGTCCAGAGAATTCTTACTTATGAAAAGGAATTCGTTTGTCTACATTTTCAAGATGTGGCAATTGATTTTAACTGGCCTCATAACAATGACGTTGTTCCTGAGAACTGAGATGCACCGGGATACAGTAACTGATGGCGGAATCTATATGGGTGCTTTGTTCTTTGTGCTCATTGTGATTATGTTCAATGGATTCTCTGAGCTATCCATGACCATTGTGAAACTACCTGTTTTCTATAAGCAAAGGGACCTTCTCTTTTATCCTTCTTGGGCATACTCTTTGCCTACATGGATCCTTAAGATTCCAATCACCTTAGTAGAAGTTGGTATTTGGGTTGCAATGACTTACTATGTTATAGGCTTTGATCCAAATATTGAAAGGTTCATCAAGCAGTTTTTTGTGCTAGTTTGCATCAACCAGATGGCATCTGCACTTTTTCGATTCATGGGGGCAGTTGGTAGGAACCTCATTGTTGCAAACACATTTGGATCATTTGCATTACTTGCAGTTATGGTCATGGGTGGATTCATTCTATCAAGAGTTGATGTGAAGAAGTGGTGGTTATGGGGTTACTGGGTCTCTCCCATGATGTATGGACAGAATGCTATAGCGGTGAATGAATTCCTCGGAAAGAGTTGGGCACATGTTCCACCTAATTCAACAGAACCATTAGGAGTGCAGGTCTTGAAGGCACGTGGGATTTTCCCAGAAGCATACTGGTATTGGTTTGGAGTTGGAGCTTCCATTGGATACATGTTACTATTCAATTTCCTTTTCCCCTTGGCCTTACATTATCTTGACCCATTTGGTAAGCCCCAAGCGTTGATATCAGAAGAAGCTTTAGCTGAGAGAAATGGTGTTAGAAATTATCACATCATTGAGATGTCGTCGAGAAGCAATGGAACTTATGGGAATGAGAGTGGAAGAAGTGTGCCCTCCAGAACTTTGTCTGCAAGAGTGGGCAGCATCAATTCAGCTGATCACAGCAGGAAGAGGGGGATGGTTCTTCCTTTCACACCCCTTTCTATCACTTTTGATGAAATCAGATATGCAGTGGACATGCCGCAGGAAATGAAGGCACAAGGCATTCTTGAAGATCAACTTGAACTGTTGAAGGGTATTAGTGGAGCTTTCAGATCAGGAGTTCTGACAGCTCTGATGGGTGTAAGTGGAGCTGGTAAAACTACCCTGATGGATGTGTTGTCTGGAAGGAAAACAGCAGGATATATTCAAGGCCAAATCACTATATCAGGGTACCCTAAGAAGCAAGAAACGTTTGCTCGCATATCGGGATACTGTGAGCAGACTGATATACACTCTCCTCATGTTACAGTCTATGAGTCCCTTGTCTATTCTGCCTGGCTAAGGTTACCCCCAGAGGTTGATTCTTCCACAAGACAGATGTTCATTGAGGAAGTAATGGAGCTAGTAGAGCTAACTTCATTGAGAGATGCACTGGTTGGATTACCTGGAGTGAATGGCTTGTCCACGGAACAACGCAAGAGGTTGACAATTGCAGTAGAACTTGTTGCCAATCCATCTATCATATTCATGGATGAACCTACGTCTGGCCTTGATGCCAGAGCTGCTGCTATAGTAATGAGAACAGTGAGGAACACAGTTGACACAGGCAGAACTGTGGTCTGTACAATCCACCAGCCAAGTATTGACATATTTGATGCTTTTGATGAGTTACTTCTCTTGAAGCGTGGAGGTGAGGAAATCTATGTGGGGCCTTTAGGCCGGCATTGTTCTGATCTGATCAATTACTTTGAGGGAATCAATGGAGTGCCAAAAATTAAGAATGGTTATAATCCTGCAACATGGATGTTGGAGGTTACTTCAGAAGCACAAGAAGCAGCTCTTGGAGTTAGCTTTGCTGAACTATACAAGAATTCCGACTTATATAGGAGAAACAAGGCCTTGATCAGGGAACTTAACACAGCCCCAGCAGGTTCTAAAGACCTGTACTTCCCTACAAAGTACTCACAGTCTTTCTTAACACAATGTAAGGCTTGCCTTTGGAAACAAAACCTATCATATTGGAGAAACCCCCCATACAGTGCAGTGAGACTTTTATTCACAACGTTCATAGCCTTATTGTTCGGGACAATATTTTGGGATATTGGCTCCAAAAGGCATAGAAAACAAGATATATTTAATGCAATGGGGTCCATGTATGCTGCAGTCCTCTTCATAGGGGTACAAAATGCTACATCTGTGCAACCAGTTGTAGCCATTGAAAGAACAGTCTTCTATAGAGAGAGAGCTGCTGGAATGTACTCAGCTTTGCCATATGCATTTGGACAGGTTGCTATTGAGATACCATACATACTGGTACAGACCCTGGTATATGGGGTAATAGTGTATGCCATGATTGGGTTTGAATGGACAGCTACCAAGTTCTTTTGGTATCTTTTCTTCATGTTCTTCACCTTTTTATACTTCACCTTGTATGGGATGATGGCTGTGGGTGCTACCCCGGATCACAACATTGCTGCTATAGTTTCCTTTGGGTTCTACTTAATATGGAACCTTTTCTCAGGATTTGTTATTCCTAGAACTAGGATGCCAGTATGGTGGAGATGGTACTGTTGGATCTGTCCTGTTTCATGGACCCTTTATGGATTGGTTACTTCACAATTTGGTGACATAACTGAACGCATAGAAACTGGAGAGACGGTGGGAGAGTTTGTAGAGAGTTATTTTGGGTATAGAGATGATTTCAAGGGCATAGCTGCTATTGTACTTTTTGGCTTTACATTGCTCTTTGGATTTACCTTTGCCTTTTCAATTAAGGCATTTAATTTCCAAAAGAGATGA 4341 0.4273 MESDELRVASARVGSSSIWRSGAVDVFSGSSRREDDEEQLKWAAIEKLPTYLRMTRGILTESQGQPVEIDINKLGPLQRKNLVERLVKIAEEDNEKFLLKLRDRIDRVGLDIPTIEVRFEHLNVEAEAHVGSRALPTIFNFCINLLEGCLNSLHLLPSRKKPFTVLHDVSGIIKPRRMTLLLGPPSSGKTTLLLALAGRLGKDLKFSGRVSYNGHGMEDFVPQRTSAYISQTDVHIGEMTVRETLAFSARCQGIGTRYDMLAELSRREKAENIKPDPDLDIYMKAAALEGQETNVVTDYIMKILGLEVCADTVVGDDMIRGISGGQRKRVTTGEMLVGPARALFMDEISTGLDSSTTFQMVNSLRQSIHILNGTAVISLLQPAPETYELFDDIILLSDGQIVYQGPRENVLEFFEFMGFKCPERKGVADFLQEVTSRKDQEQYWANKDEPYTFVSVREFADAFQSFHIGRKLGDELATPFDKSKGHPAVLTKNKYGVCKKELLKACVSREFLLMKRNSFVYIFKMWQLILTGLITMTLFLRTEMHRDTVTDGGIYMGALFFVLIVIMFNGFSELSMTIVKLPVFYKQRDLLFYPSWAYSLPTWILKIPITLVEVGIWVAMTYYVIGFDPNIERFIKQFFVLVCINQMASALFRFMGAVGRNLIVANTFGSFALLAVMVMGGFILSRVDVKKWWLWGYWVSPMMYGQNAIAVNEFLGKSWAHVPPNSTEPLGVQVLKARGIFPEAYWYWFGVGASIGYMLLFNFLFPLALHYLDPFGKPQALISEEALAERNGVRNYHIIEMSSRSNGTYGNESGRSVPSRTLSARVGSINSADHSRKRGMVLPFTPLSITFDEIRYAVDMPQEMKAQGILEDQLELLKGISGAFRSGVLTALMGVSGAGKTTLMDVLSGRKTAGYIQGQITISGYPKKQETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSSTRQMFIEEVMELVELTSLRDALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLLKRGGEEIYVGPLGRHCSDLINYFEGINGVPKIKNGYNPATWMLEVTSEAQEAALGVSFAELYKNSDLYRRNKALIRELNTAPAGSKDLYFPTKYSQSFLTQCKACLWKQNLSYWRNPPYSAVRLLFTTFIALLFGTIFWDIGSKRHRKQDIFNAMGSMYAAVLFIGVQNATSVQPVVAIERTVFYRERAAGMYSALPYAFGQVAIEIPYILVQTLVYGVIVYAMIGFEWTATKFFWYLFFMFFTFLYFTLYGMMAVGATPDHNIAAIVSFGFYLIWNLFSGFVIPRTRMPVWWRWYCWICPVSWTLYGLVTSQFGDITERIETGETVGEFVESYFGYRDDFKGIAAIVLFGFTLLFGFTFAFSIKAFNFQKR* 1447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0947 1446 Pfam ABC-2 type transporter 381 433 IPR043926 GO:0140359
Dod09g0947 1446 Pfam ABC transporter 166 348 IPR003439 GO:0005524
Dod09g0947 1446 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 873 1086 IPR027417 -
Dod09g0947 1446 Pfam Plant PDR ABC transporter associated 719 782 IPR013581 -
Dod09g0947 1446 Gene3D - 153 459 IPR027417 -
Dod09g0947 1446 SMART AAA_5 175 407 IPR003593 -
Dod09g0947 1446 SMART AAA_5 886 1078 IPR003593 -
Dod09g0947 1446 Gene3D - 866 1090 IPR027417 -
Dod09g0947 1446 Pfam ABC-2 type transporter 1174 1388 IPR013525 GO:0016020|GO:0140359
Dod09g0947 1446 Pfam ABC-2 type transporter 502 714 IPR013525 GO:0016020|GO:0140359
Dod09g0947 1446 CDD ABCG_PDR_domain2 846 1084 IPR034003 -
Dod09g0947 1446 Pfam ABC-transporter N-terminal 90 141 IPR029481 -
Dod09g0947 1446 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 161 423 IPR027417 -
Dod09g0947 1446 Pfam ABC transporter 877 1029 IPR003439 GO:0005524
Dod09g0947 1446 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 150 423 IPR003439 GO:0005524
Dod09g0947 1446 PANTHER CASSETTE TRANSPORTER, PUTATIVE-RELATED 9 1446 - -
Dod09g0947 1446 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 849 1101 IPR003439 GO:0005524
Dod09g0947 1446 PANTHER ATP-BINDING CASSETTE TRANSPORTER 9 1446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0947 Dod-Chr9 29370751 29379391 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0947 886 1103 Calmodulin-binding Proteins AT2G36910 25.778 7.59e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0947 K08711 - gmx:100804030 2649.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1652 08 39141118 39151471 Dod09g0947 09 29370751 29379391 PCT