LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dod09g0921	ATGTCTATGCTCTTGTTTCTCATCATGATCATGACAATCCAAAGTGTTACAAGCACATTGATTGACCCCAACACTTTCTCTTTCATCTCTTTCAGCCCTGAAAGCTGCAACAATGGCGAACTTCTCTGCATGGGCTCAGCCACTTCGGGAAATGGGTACTTGAGCCTCACGCCAGAGCCACAACAAGGCAATTCAGGTTCAACAACCAACAAAGTAGGCCGGGTTCTGTACCCTCATCCTGTGCATGCTTGGCCAGCAATTATCTCTACCACATTCACCATTAGGATCACTCCCTTTGCCAATTCAACTGCCTCCGGCGATGGAATGGCGTTCGTGTTTGCACAAGATAACAGGCCCTCTCCAAATGATAGTGGTTATTTTCGACAACTAGCTGTGGAAATGGACACTTTCAGGAATGAGTTTGATCATGATGGAAACCACATTGGTTTAGTCACAACAAGCATCTTAAATCCAGTTGCTTTTCAGAGTCTCAATAGCTCCCGGGTTGACCTCAAGAGTGGAAAAGACGTTGAGGTCAAAATTGACTATGATGGATGGGCTAAGATGATTTTGGTCTCCGTGGGGTACCCTGAAGGCCAGTTAAAGAGCATTCTTAACCATTCAATTACCCTACCAGATGTGATTCCAAGAACTGTTTATGTTGGTTTCACAGCCTCCACAGGCAAGACTTCCTCTGAAAGCCATAAGGTCCTCAATTGGGTATTCACATCAGTGCCAGTTCCTGTTCCTTCTGTTAATCTCAGCAAAGCTGCCAAGACCACATTGGTGATCTTCATTCCAGTTCTTCTGTTTTTGTCAATAAGCTTAGTCCCTTTTATTTGGAGAGCTTGGAAGAAAAGATATGAGAGGTGTATCAAGCTTGATGATATAGAGAGCCTATCAAGGACTGCTGCAGATATCCCCAAGATGTTTACTTACAAGCAACTGTCAAAGGCCACTTGTAACTTCAGCAAAGAAAACCTTTTGGGCAGAGGTGGATTTGGTTGTGTATATAAAGGAGTCATATCAGACTATCCTAAAACATTTGCGGTAAAGAAAATTTCAGCAACCTCCAAACAAGGTGAAAGAGAGTTCTTGGCTGAAATATGCACCATAGGGCGTCTCAGGCACAAAAACTTAGTGCAGCTCCAAGGGTGGTGCCATGAGGGTGAGAATCTTCTCCTGGTTTATGACTATATGCAAAACGGAAGCCTTGACCACTTCATAGGAAAGGACATTCTAGACTGGCAAACCAGGCACAAGATATTAACAGGATTGGCATCAGCATTGCTTTACCTTCATGAAGAATGTGGAAACCCAGTTGTTCATAGAGATGTTAAGCCTAACAATGTTATGTTGGACTCTGATTACAATGCTCACTTAGGCGATTTCGGGCTAGCAAGACTACTCAAAAATGAAGATTCAGTGACCACAAATCTAGCTGGAACTCCAGGATACTTGGCCCCTGAAGTAGGCTTCACAGGGAAGGCTACACCTGAGTCAGATGTGTATAGCTTTGGCATGGTGGTACTTGAAGTCATATGTGGGAGAAGATCAAAGATCATCATGGAAGAGAACAGTTTGGTGGACTATGTATGGAACTTGCATGCCCAAGATGCATTGCTTGAGTGTGTTGACAAGCTACTGAAGGACCAGTTTGATGAGGAAGAAGCCAAAAGGGCATTGATGGTTGGTCTTGCATGCTTGCATCCGGATTGCATGCTAAGGCCAAGGATGAGAAAAGTGTTGCACATTTTCCTGAACCCAAATGAGCCTTTGATGGAGGTACCAGGAATAAGACCCACTGGAGTTTATGTTACGGTTTCTTCATATGCAACAACTACTGAATCTGGCTCCAGAAGTGAACAGCTGCTCCAATCATCCACGACATCCTCGGAGGCAATTTCCACTGTGCATGACAGGTGA	1926	0.4424	MSMLLFLIMIMTIQSVTSTLIDPNTFSFISFSPESCNNGELLCMGSATSGNGYLSLTPEPQQGNSGSTTNKVGRVLYPHPVHAWPAIISTTFTIRITPFANSTASGDGMAFVFAQDNRPSPNDSGYFRQLAVEMDTFRNEFDHDGNHIGLVTTSILNPVAFQSLNSSRVDLKSGKDVEVKIDYDGWAKMILVSVGYPEGQLKSILNHSITLPDVIPRTVYVGFTASTGKTSSESHKVLNWVFTSVPVPVPSVNLSKAAKTTLVIFIPVLLFLSISLVPFIWRAWKKRYERCIKLDDIESLSRTAADIPKMFTYKQLSKATCNFSKENLLGRGGFGCVYKGVISDYPKTFAVKKISATSKQGEREFLAEICTIGRLRHKNLVQLQGWCHEGENLLLVYDYMQNGSLDHFIGKDILDWQTRHKILTGLASALLYLHEECGNPVVHRDVKPNNVMLDSDYNAHLGDFGLARLLKNEDSVTTNLAGTPGYLAPEVGFTGKATPESDVYSFGMVVLEVICGRRSKIIMEENSLVDYVWNLHAQDALLECVDKLLKDQFDEEEAKRALMVGLACLHPDCMLRPRMRKVLHIFLNPNEPLMEVPGIRPTGVYVTVSSYATTTESGSRSEQLLQSSTTSSEAISTVHDR*	642

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dod09g0921	641	Gene3D	Phosphorylase Kinase; domain 1	308	399	-	-
	Dod09g0921	641	Gene3D	Transferase(Phosphotransferase) domain 1	400	592	-	-
	Dod09g0921	641	Pfam	Legume lectin domain	25	251	IPR001220	GO:0030246
	Dod09g0921	641	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	441	453	IPR008271	GO:0004672\|GO:0006468
	Dod09g0921	641	ProSitePatterns	Protein kinases ATP-binding region signature.	329	353	IPR017441	GO:0005524
	Dod09g0921	641	Gene3D	-	22	254	-	-
	Dod09g0921	641	SUPERFAMILY	Concanavalin A-like lectins/glucanases	28	245	IPR013320	-
	Dod09g0921	641	MobiDBLite	consensus disorder prediction	617	635	-	-
	Dod09g0921	641	PANTHER	-	26	250	-	-
	Dod09g0921	641	Pfam	Protein kinase domain	324	584	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Dod09g0921	641	CDD	STKc_IRAK	329	586	-	-
	Dod09g0921	641	ProSiteProfiles	Protein kinase domain profile.	323	587	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Dod09g0921	641	MobiDBLite	consensus disorder prediction	617	641	-	-
	Dod09g0921	641	PANTHER	-	277	632	-	-
	Dod09g0921	641	CDD	lectin_legume_LecRK_Arcelin_ConA	26	244	IPR001220	GO:0030246
	Dod09g0921	641	PANTHER	L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.1	277	632	-	-
	Dod09g0921	641	PANTHER	L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.1	26	250	-	-
	Dod09g0921	641	SUPERFAMILY	Protein kinase-like (PK-like)	307	605	IPR011009	-
	Dod09g0921	641	SMART	serkin_6	323	587	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dod09g0921	Dod-Chr9	28985639	28988588	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dod09g0921	22	602	Receptor kinase-like Gene Family	AT5G55830	38.462	4.98e-116	360

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_L-LEC	Dod09g0921		Pkinase	2.4e-48	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Dod09g0921	-		-	gmx:102665030	888.641