Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0914 ATGGTACAAGCAAGGAAGTTCAGAGGAGTCAGGCAGCGCCAGTGGGGCTCCTGGGTGTCAGAGATTCGCCACCCTTTACTGAAGAGAAGGGTGTGGCTAGGGACATTTGAGACAGCTGAGGCAGCAGCAAGGGCATATGACCAAGCAGCCATTTTGATGAATGGCCAAAATGCCAAGACCAATTTCCCTAAGAACCGAGCTGCTGATCATGATCAGAATGCGACCCCTTGTGATGATGACTCTTTCTTATCTCCCAAGGCTCTTTCAGAGCTGCTGAGCACAAAGCTGAGAAAGTGCTGCAAGGACCCTTCTCCATCGCTCACATGTCTGAGGCTGGATGCTGACAATTCCCACATTGGGGTGTGGCAAAAGGGAGCAGGACGGCATTCTGACTCTAATTGGGTGATGAGGGTGCAGCTTGGGAACAAACAGCAAGAGGGTAACTCCAATTTGTCATCAGGGTATCCACTGTGTACTGATGGTGATGCTGAAAATGTGTTGGAAGAAGAGAATAGAGTTGCCATGCAGATGATTGAGGAGCTACTCAATTGGAACTATCCCTATGGTTCAAGTTCAAGTTCAAGTACTAATAATAACCCGGCCCTGCAGCATGAAGATCAGAAAAGGAACCTTCCATGTCAGGGTTCTTGA 651 0.4869 MVQARKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAAILMNGQNAKTNFPKNRAADHDQNATPCDDDSFLSPKALSELLSTKLRKCCKDPSPSLTCLRLDADNSHIGVWQKGAGRHSDSNWVMRVQLGNKQQEGNSNLSSGYPLCTDGDAENVLEEENRVAMQMIEELLNWNYPYGSSSSSSTNNNPALQHEDQKRNLPCQGS* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0914 216 PRINTS Ethylene responsive element binding protein signature 7 18 IPR001471 GO:0003700|GO:0006355
Dod09g0914 216 PRINTS Ethylene responsive element binding protein signature 29 45 IPR001471 GO:0003700|GO:0006355
Dod09g0914 216 MobiDBLite consensus disorder prediction 189 216 - -
Dod09g0914 216 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR SHINE 2 1 191 - -
Dod09g0914 216 Pfam AP2 domain 6 55 IPR001471 GO:0003700|GO:0006355
Dod09g0914 216 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 1 191 - -
Dod09g0914 216 SMART rav1_2 6 69 IPR001471 GO:0003700|GO:0006355
Dod09g0914 216 Gene3D AP2/ERF domain 5 64 IPR036955 GO:0003700|GO:0006355
Dod09g0914 216 SUPERFAMILY DNA-binding domain 6 64 IPR016177 GO:0003677
Dod09g0914 216 CDD AP2 6 63 IPR001471 GO:0003700|GO:0006355
Dod09g0914 216 ProSiteProfiles AP2/ERF domain profile. 6 63 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0914 Dod-Chr9 28890843 28892455 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0914 1 192 AP2-EREBP Transcription Factor Family AT5G25390 61.026 7.30e-73 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Dod09g0914 AP2 2.6e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0914 - - lang:109326202 293.893
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod09g0914 09 28890843 28892455 Dod09g0914 09 28890843 28892455 ECH