Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0913 ATGCTGATACAAGTAACACCACACTCCTGGGTCTTAACATGCAAAATCTTGATGAAGATTGTAGGTAGGAGGCTGTATGCAACAGTTGATCTAGACAAGGCAAGGGTTGGAAGGACCAGAATGATAGGAAACCAGCCCTCAAACCCAAAGTGGAATGAGAACTTTGAGATATATTGTGCTCACAACATCTCAGACGTTGTGTTCACTGTCAAAGATGGCAACCCAATTGGTGCAACTCTAATTGGAAGAGCTTACATCTCCTCTGACCTAGTCAAGAAGGGCCGCCCCATGATTGGCAGATGGTTAGAGATCGTAGATGAAGACAATCGTCCAGTGCCAGGTGGCTCTAGAATCCGTGTCAGCGTGCAATACACGAGTGTCAGTGAATGGTACTCTCAGTCTGAGGGAGCAACAAGGATGCCGTTTGGTGGAATAACAATGCCTTTCGATGGAGTCCCCCGCACATTCTTCAACCAAAGACGAGGTTGTAATGTCACTTTGTACCAAGATGCTCATGTCCCTTATGTCCCTCGTGGCTCTCTACCTTGGATTCTACTGTCTGAAGGGAAGCACTATGAGCCTGGGAGATGCTGGGAGGATATTTACAATGCCATCTTGGATGCTAAGTACTTGATTTACATAGCTGGTTGGTCTGTGTACACTGAGATAAGATTGGTTAGGGGCCCAGAGAGTCCAAGTTTGACCCTTGGGCAGCTTCTCAAGCAGAAAGCAGATGAAGGTGTTAGAGTCCTCATGCTTGTTTGGGATGACAGAACTTCTGTTCCAGACCTCAAGAAAGATGGCTTGATGGCAACCCATGATCAAGAAACTAAGCAGTACTTTAGAAACACAAATGTGCATTGTGAGTTGTGTCCGAGGAACCCGGATGATGGAAAAAGCATTGTTCAAGGCATTCAAATCTCAACCATGTTCACTCACCACCAGAAGACTATAGTTGTCGACAGCAGCAATGTTCATGGTGAAGGGGCTCAGAAGAGAAGGATCATAAGCTTCATTGGTGGGATTGATCTCTGTGATGGGAGATATGATACTCAGGAACATCCTTTGTTTTCAACTCTGAATAATGTCCACCGTGATGATTTCCACCAGCCGAACTTCCCAGGAGCTTCCATTAAGAAAGGTGGTCCAAGAGAGCCATGGCATGACATTCACTGCAAGCTAGAAGGACCAGTTGCATGGGATGTCTTGTACAATTTTGAGCAAAGGTGGGAGAAGCAAGTTCGCAAGAAACTTCTATTCACACTTGACCAGCTTGATCAAATTCTTGTACACCCAAATGAGACAACTAAATCAGAAGAGGACAGGGAGACATGGAATGTTCAGTTGTTTAGATCTATTGATGGTGGAGACGTTTCTGGATTACCCCAAAACCCAGATGAAGTTGCTGAATTAGGCCTTGTTAGCGGCAAAGATAACGTCATAGATAGAAGCATTCAGGATGCTTATATAAATGCTATTAGGAGAGCAAAGAATTTCATCTACATTGAGAATCAATACTTCATAGGGAGTTCATATGGTTGGAAAGCATCGGATATAAAAGTGGAGGATGTTGGTGCTTTGCATCTTATACCAAAGGAGCTGTCACTGAAGATTGTTAACAAGATTGAAGCAGGACAAAGGTTTGCAGTGTATGTGGTGATCCCAATGTGGCCAGAAGGTGTACCTGAAAGTGCTTCAGTTCAGGCAATATTAGATTGGCAAAGTAGGACCGATGGAGATGATGTATTCTGA 1752 0.4429 MLIQVTPHSWVLTCKILMKIVGRRLYATVDLDKARVGRTRMIGNQPSNPKWNENFEIYCAHNISDVVFTVKDGNPIGATLIGRAYISSDLVKKGRPMIGRWLEIVDEDNRPVPGGSRIRVSVQYTSVSEWYSQSEGATRMPFGGITMPFDGVPRTFFNQRRGCNVTLYQDAHVPYVPRGSLPWILLSEGKHYEPGRCWEDIYNAILDAKYLIYIAGWSVYTEIRLVRGPESPSLTLGQLLKQKADEGVRVLMLVWDDRTSVPDLKKDGLMATHDQETKQYFRNTNVHCELCPRNPDDGKSIVQGIQISTMFTHHQKTIVVDSSNVHGEGAQKRRIISFIGGIDLCDGRYDTQEHPLFSTLNNVHRDDFHQPNFPGASIKKGGPREPWHDIHCKLEGPVAWDVLYNFEQRWEKQVRKKLLFTLDQLDQILVHPNETTKSEEDRETWNVQLFRSIDGGDVSGLPQNPDEVAELGLVSGKDNVIDRSIQDAYINAIRRAKNFIYIENQYFIGSSYGWKASDIKVEDVGALHLIPKELSLKIVNKIEAGQRFAVYVVIPMWPEGVPESASVQAILDWQSRTDGDDVF* 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0913 583 PANTHER PHOSPHOLIPASE D 11 577 IPR015679 -
Dod09g0913 583 PANTHER PHOSPHOLIPASE D ALPHA 3 11 577 - -
Dod09g0913 583 SUPERFAMILY Phospholipase D/nuclease 149 425 - -
Dod09g0913 583 Pfam Phospholipase D Active site motif 309 348 IPR001736 GO:0003824
Dod09g0913 583 Gene3D Endonuclease Chain A 188 443 - -
Dod09g0913 583 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 24 127 IPR035892 -
Dod09g0913 583 Pfam C2 domain 24 97 IPR000008 -
Dod09g0913 583 Gene3D Endonuclease Chain A 458 577 - -
Dod09g0913 583 ProSiteProfiles C2 domain profile. 1 102 IPR000008 -
Dod09g0913 583 SMART pld_4 309 348 IPR001736 GO:0003824
Dod09g0913 583 Gene3D C2 domain 22 125 IPR035892 -
Dod09g0913 583 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 309 348 IPR001736 GO:0003824
Dod09g0913 583 SMART C2_3c 11 99 IPR000008 -
Dod09g0913 583 SUPERFAMILY Phospholipase D/nuclease 485 573 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0913 Dod-Chr9 28873414 28875165 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0913 24 577 Phospholipase D Gene Family (Wang group) AT3G15730 64.643 0.0 740
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0913 K01115 - gmx:100794115 823.542