Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0903 ATGGGAAAACATTGGTCTTTCTTTCATGTCATGGGCACCTTGGCCTTGTGGATCCTTCTTCTGTGTGAAGTCTGTTTGGCTGGTGTTCAATTTAAAGGCAAGGTCTCCCCAGGATTTCAAGGTGCACAAATGAATTGGATTGACAGAGAAGGCGTGTTCCTTGTGTCGAACGGTGGAGAATTTGCCTTCGGCTTTGTCACCACCGCCAATGACAACACACAGTTTCTACTAGCAGTCATCCACCAGAAGAGTACTCAAGTGGTCTGGACTGCAAATAGAGCAAATCCTGTGGCTAATTCTGATAAATTTGTGTTTGATAACAAGGGCAATGCCTTCTTGCAGAAAGGTGGAACTGTGGTGTGGTCTACAGATACAAGTGGCAAGGGTGTTTCCTCAATGGAATTGCTAGACAATGGCGATTTGGTCTTGTTTGGGAAAGATAATACTACAATAATATGGCAGAGTTTCAGCCACCCAACAGATATCTTGTTGCCATCACAGGATTTCACAGAGGGGATGAAACTCATCAGTGATCCTAGCCCCAACAACTTGACCTATGTCCTTGAGATCAAATCAGGCAATGTCATTCTCTCTGCTGGTTTCAAGACTCCACAGGCTTATTGGACTATGCAGAAGGATAACCGCAAAACCATCAATCAAAACGGCGATGTGGTGGCCACGGCAACAATTAGTAACAATTCCTGGAAGTTCTATGACAAGAACAAATCCTTGCTGTGGCAATTCATTTTCTCTGATGGTCCAGGTGCTAATGACACCTGGGCTGCAATCTTGGGAAGCAATGGCTTCATCACTTTCTTTGATCTTGAAGGTGGGGGGTTAAATGCCCCTTCCCCAACAAGAATACCACAAGGTTCTTGTGATACACCAGAAGCTTGTGATCCATATAACATATGCACAGGCAACCAGAAATGCAGCTGCCCTTCTGTTCTGCCCAATTGCGAACCTGGTTTTGTCTCTCCTTGTGATGATAGCTTAAAAAATTCCATCAATTTGGTGAAAGCTGATAATGGACTTGATTACTTTGCACTTCAGTTTCTTCAACCCTTTTCAAAGACCAACTTGTTAGGTTGCCAATCATCTTGCAGTGGAAACTGCTCATGCCTTGCAATGTTCTTCCAACCCAGTTCGGGGAACTGTTTCCTGTTGGACAGCATAGGAAGCTTTGAGAGGTCAAGTACTGATTCTGGTTATGTTTCTTACATCAAGGTCTCAGGTGATGGAAGTGGTGGCACTAGGGGAAGTGGAAGCAGCAATAAGCATACCATAGTTGTTGTGATCATTGTCATAATAACATTGCTTGTCATTTCTTGCCTAGTCTTTTTGGGACTCAGGTACTACAGGAGGAAGCAAAAGTTGCCTGAGTCTCCTAGAGAGAATTCAGAAGAGGACAATTTCTTGGAGAATCTAACTGGCATGCCAGTCCGTTACAGCTACAAGGATCTAGAAGCTGCAACTACCAACTTCACAGTGAAGCTTGGGCAAGGGGGCTTTGGCTCAGTTTATAAAGGGGTTCTACCAGATGGGACTCAAGTTGCTGTGAAGAAGCTGGAAGGTATTGGCCAAGGGAAGAAAGAGTTCAGGGCTGAAGTTAGCATTATTGGAAGTATCCATCACCTCCATTTGGTCAAGCTTAGAGGATTCTGTGTTGAAGGGACTCACAGGCTTCTTGCTTATGAGTACATGGCCAATGGCTCATTGGATAAATGGATATTCAAGAAAAACAGAGGCGAGTTCCTTTTGGATTGGGATACAAGGTTTAATATAGCTCTTGGAACAGCAAAAGGACTTGCTTACTTGCATGAAGATTGTGACTCAAAGATTGTTCATTGTGACATCAAGCCAGAAAATGTGCTCCTTGATGATCATTTCATGGCCAAGGTATCAGATTTTGGTCTGGCTAAGCTCATGAACCGAGAACAAAGCCATGTTTTCACAACACTAAGGGGGACTAGGGGGTACCTTGCACCTGAATGGTTAACAAACTATGCTATATCAGAGAAGAGTGATGTGTACAGCTATGGTATGTTGTTGCTAGAGATTATTGGTGGAAGGAAAAACTATGATCCCGGTGAATCTTCAGAGAAATCCCATTTCCCAACCTATGCTTTTAAGATGATGGAAGAAGGGAGGCTAAAGGATATTCTTGATTCAGTGTTGATAACTGATGTGAATGATGACAGGGTTCATACAGCTATCAAAGTTGCACTATGGTGCATACAGGAAGACATGGCAATGAGGCCTTCCATGACCAAAGTTGTGCAAATGCTAGAGGGTCTTTGCACTGTTCCAAGGCCACCAACTAGTTCACCATTCTCGGGTTCTCGCCTTTTCTCCAATGTGTTCAAATCCACCAGTGATGGGGCCACCACCTCTTCAGGCCCATCTGATCGTAACAGTGACGCTTATCAGTCTGCAGTTCGCCTTTCAGGACCAAGATAA 2460 0.4407 MGKHWSFFHVMGTLALWILLLCEVCLAGVQFKGKVSPGFQGAQMNWIDREGVFLVSNGGEFAFGFVTTANDNTQFLLAVIHQKSTQVVWTANRANPVANSDKFVFDNKGNAFLQKGGTVVWSTDTSGKGVSSMELLDNGDLVLFGKDNTTIIWQSFSHPTDILLPSQDFTEGMKLISDPSPNNLTYVLEIKSGNVILSAGFKTPQAYWTMQKDNRKTINQNGDVVATATISNNSWKFYDKNKSLLWQFIFSDGPGANDTWAAILGSNGFITFFDLEGGGLNAPSPTRIPQGSCDTPEACDPYNICTGNQKCSCPSVLPNCEPGFVSPCDDSLKNSINLVKADNGLDYFALQFLQPFSKTNLLGCQSSCSGNCSCLAMFFQPSSGNCFLLDSIGSFERSSTDSGYVSYIKVSGDGSGGTRGSGSSNKHTIVVVIIVIITLLVISCLVFLGLRYYRRKQKLPESPRENSEEDNFLENLTGMPVRYSYKDLEAATTNFTVKLGQGGFGSVYKGVLPDGTQVAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGFCVEGTHRLLAYEYMANGSLDKWIFKKNRGEFLLDWDTRFNIALGTAKGLAYLHEDCDSKIVHCDIKPENVLLDDHFMAKVSDFGLAKLMNREQSHVFTTLRGTRGYLAPEWLTNYAISEKSDVYSYGMLLLEIIGGRKNYDPGESSEKSHFPTYAFKMMEEGRLKDILDSVLITDVNDDRVHTAIKVALWCIQEDMAMRPSMTKVVQMLEGLCTVPRPPTSSPFSGSRLFSNVFKSTSDGATTSSGPSDRNSDAYQSAVRLSGPR* 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0903 819 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE SD2-5 1 819 - -
Dod09g0903 819 CDD B_lectin 51 159 IPR001480 -
Dod09g0903 819 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 115 330 IPR011047 -
Dod09g0903 819 CDD STKc_IRAK 499 766 - -
Dod09g0903 819 SMART blect_4 45 159 IPR001480 -
Dod09g0903 819 MobiDBLite consensus disorder prediction 790 812 - -
Dod09g0903 819 Gene3D Phosphorylase Kinase; domain 1 458 567 - -
Dod09g0903 819 ProSiteProfiles Bulb-type lectin domain profile. 39 156 IPR001480 -
Dod09g0903 819 SUPERFAMILY Protein kinase-like (PK-like) 474 764 IPR011009 -
Dod09g0903 819 Gene3D Transferase(Phosphotransferase) domain 1 568 770 - -
Dod09g0903 819 ProSitePatterns Protein kinases ATP-binding region signature. 499 522 IPR017441 GO:0005524
Dod09g0903 819 Pfam D-mannose binding lectin 87 169 IPR001480 -
Dod09g0903 819 ProSiteProfiles Protein kinase domain profile. 493 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g0903 819 Pfam Protein kinase domain 497 761 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g0903 819 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 1 819 - -
Dod09g0903 819 PIRSF SRK 8 814 IPR024171 GO:0004674
Dod09g0903 819 MobiDBLite consensus disorder prediction 790 819 - -
Dod09g0903 819 Gene3D - 48 158 IPR036426 -
Dod09g0903 819 SUPERFAMILY alpha-D-mannose-specific plant lectins 85 210 IPR036426 -
Dod09g0903 819 SMART serkin_6 493 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g0903 819 ProSitePatterns Serine/Threonine protein kinases active-site signature. 614 626 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0903 Dod-Chr9 28785900 28789011 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0903 439 775 Receptor kinase-like Gene Family AT5G20050 45.225 1.48e-95 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Dod09g0903 Pkinase 8.5e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0903 - - gmx:100791158 1296.95