Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0887 ATGACTGAAGATAACATTGAAAGACATGTAGAGGATCTAGATCTCCCGTTATTTGATCTACCAACAATTACTAGAGCCACTAACAACTTCTTGAGGGAGAATAAGATTGGACAAGGGGGCTTCGGACCTGTATATAAGGGAAAATTAGCAAATGGGCAAGAAATTGCTGTTAAGAGACTTTCAAAGAGCTCTGGACAAGGAATGACTGAGTTTATTAATGAAGTAAAACTGATTGCTAAACTTCAACACAGAAATCTTGTAAAACTTCTTGGTTGCTGCATTCAGGGAGAAGAAAAGTTGCTAATTTATGAATACATGGCTAATGGTAGCCTAGACTCCTTCATTTTTGGCCATATCAAAGGTAAATTGATAAATTGGCCTCAACGCTTTCACATAGTATTTGGAATTGCTAGAGGTTTGTTGTATCTTCATCAAGATTCTCGATTAAGAATCATTCATAGAGATCTCAAAACAAGTAATATTTTACTTGATGATAAGTTGAATCCAAAAATATCTGATTTTGGAATGGCTAAAGCTTTTGGTGGAGATCAAACTGAAGGAAACACAAATAGAGTAGTTGGAACTTAG 588 0.3537 MTEDNIERHVEDLDLPLFDLPTITRATNNFLRENKIGQGGFGPVYKGKLANGQEIAVKRLSKSSGQGMTEFINEVKLIAKLQHRNLVKLLGCCIQGEEKLLIYEYMANGSLDSFIFGHIKGKLINWPQRFHIVFGIARGLLYLHQDSRLRIIHRDLKTSNILLDDKLNPKISDFGMAKAFGGDQTEGNTNRVVGT* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0887 195 Gene3D Transferase(Phosphotransferase) domain 1 106 195 - -
Dod09g0887 195 ProSiteProfiles Protein kinase domain profile. 30 195 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g0887 195 Gene3D Phosphorylase Kinase; domain 1 4 105 - -
Dod09g0887 195 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 7 195 - -
Dod09g0887 195 SUPERFAMILY Protein kinase-like (PK-like) 15 195 IPR011009 -
Dod09g0887 195 Pfam Protein tyrosine and serine/threonine kinase 33 184 IPR001245 GO:0004672|GO:0006468
Dod09g0887 195 SMART serkin_6 30 193 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g0887 195 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 7 195 - -
Dod09g0887 195 ProSitePatterns Serine/Threonine protein kinases active-site signature. 151 163 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0887 Dod-Chr9 28536647 28537890 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0887 2 195 Receptor kinase-like Gene Family AT4G23190 59.278 5.99e-78 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dod09g0887 PK_Tyr_Ser-Thr 2.9e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0887 - - gmx:100812022 328.946