Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0886 ATGATTTCTTGCAGTGGGTACATGGCACCAGAATATGCTGTTGATGGCCTATTTTCAATAAAATCTGATGTATTCAGCTTTGGTATTTTATTGTTGGAGATTATATGTGGGAATAAGAATAGAGCTCTTTATCACGCAAACAGCACGTACAACCTTGTTGGTTACGCATGGACACTTTGGAAGGAGGGCAAGGCCCTGCAATTAATGGATGCCAACATAAAGGACTCGTGCATTGACTCTGAAGTATTGCGTTGCATCCATGTTAGTCTAATTTGCGTGCAACAATACCCAGAGGATAGACCTACCATGTCCTCAGTGCTTCGAATGTTAGAGAGTGAGCTGGAATTGGTTGATCCCAAAGAACCTGGTTTTTTTCCAAGGAAGGATTCTAATGAAGAAAATTTCTCCCTCAGTGATGGCATGACCTTAGTGTCCCAAGGTGGAATGTTTGAACTCGGTTTCTTCAGCCCTGGAAATTCCGAAAAACGTTACCTGGGGATTTGGTACAAGAAAGTGGCCATGTATGCAGTCGTTTGGGTTGCAAACAGGGACAACCCCATCAGTGATACCTCAGGAATACTAACTGTGAACAGCACAGGCAATCTTGTACTTAGTCAAAATTATTCTATTATTTGGTACACAACCTCTAAAAAGCAAGCACAGAATCCTGTGGCAGTGCTCTTGGACAGTGGCAATCTTGTGGTAAGAAATGATGGGGATCCAAACTCGGAAGCCTATTTGTGGCAAAGCTTTGACTATCCGGCTGATACATATTTGCCTGGGATGAAGATCGGAAGAGACCTCAAAAATGGTTTGGATTGGCGCTTGACTTCTTGGAAGAGTCCAGATGATCCATCCCCTGGAGACCTCTTTTGGGGTTTAGCGCTCAGTGATTATCCTGAGTACTCTATGATGAACGGACAAGAAAAGTTCTCGAGGATTGGACCTTGGAATGGCCTATATTTTAGTGGATTGCCAAATCTTAAGTCTGACTCTAATGTTATATTCACTTATGTCGCCAACAAGGACGAGATATTCTACACGTCTAGCTCCAAGGATAATTCTGTCTTCTCAAGAGTAGTTATAAACCAAACAAATAGAGTGTTTAATCGCTATGTCTGGGTGGAAAAAGAACAGAATTGGAACATATTTGAATTGCTACCAAGTGATGTCTGTGGTAATTATGGCCTCTGTGGAGCCAATGGGTATTGCATAACTACACAATCACAAATCTGCCAATGTTTGGAAGGGTTCAGTCCAAAGTCACCACAAGCATGGAACTCATCCAATTGGGCTTAA 1299 0.4226 MISCSGYMAPEYAVDGLFSIKSDVFSFGILLLEIICGNKNRALYHANSTYNLVGYAWTLWKEGKALQLMDANIKDSCIDSEVLRCIHVSLICVQQYPEDRPTMSSVLRMLESELELVDPKEPGFFPRKDSNEENFSLSDGMTLVSQGGMFELGFFSPGNSEKRYLGIWYKKVAMYAVVWVANRDNPISDTSGILTVNSTGNLVLSQNYSIIWYTTSKKQAQNPVAVLLDSGNLVVRNDGDPNSEAYLWQSFDYPADTYLPGMKIGRDLKNGLDWRLTSWKSPDDPSPGDLFWGLALSDYPEYSMMNGQEKFSRIGPWNGLYFSGLPNLKSDSNVIFTYVANKDEIFYTSSSKDNSVFSRVVINQTNRVFNRYVWVEKEQNWNIFELLPSDVCGNYGLCGANGYCITTQSQICQCLEGFSPKSPQAWNSSNWA* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0886 432 CDD B_lectin 134 254 IPR001480 -
Dod09g0886 432 PANTHER - 3 135 - -
Dod09g0886 432 SUPERFAMILY Protein kinase-like (PK-like) 5 138 IPR011009 -
Dod09g0886 432 Pfam Protein tyrosine and serine/threonine kinase 6 109 IPR001245 GO:0004672|GO:0006468
Dod09g0886 432 Pfam S-locus glycoprotein domain 313 422 IPR000858 GO:0048544
Dod09g0886 432 ProSiteProfiles Bulb-type lectin domain profile. 128 248 IPR001480 -
Dod09g0886 432 ProSiteProfiles Protein kinase domain profile. 1 114 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g0886 432 Gene3D - 126 251 IPR036426 -
Dod09g0886 432 SUPERFAMILY alpha-D-mannose-specific plant lectins 177 285 IPR036426 -
Dod09g0886 432 SMART blect_4 134 254 IPR001480 -
Dod09g0886 432 PANTHER S-LOCUS GLYCOPROTEIN DOMAIN, PAN/APPLE DOMAIN PROTEIN-RELATED 3 135 - -
Dod09g0886 432 Pfam D-mannose binding lectin 177 280 IPR001480 -
Dod09g0886 432 PANTHER - 135 431 - -
Dod09g0886 432 PANTHER S-LOCUS GLYCOPROTEIN DOMAIN, PAN/APPLE DOMAIN PROTEIN-RELATED 135 431 - -
Dod09g0886 432 Gene3D Transferase(Phosphotransferase) domain 1 1 120 - -
Dod09g0886 432 ProSiteProfiles EGF-like domain profile. 388 424 IPR000742 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0886 Dod-Chr9 28500261 28536582 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0886 1 124 Receptor kinase-like Gene Family AT4G23230 51.200 4.71e-37 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dod09g0886 S_locus_glycop 4e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0886 - - pper:18781230 498.819