Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0883 ATGTTCGCGGAAGAGAATGGCCTCAAGGGAGACCCAAGGCTTCAAGCCATTTCTCAAGCCATCAGAGTCGTGCCTCACTTCCCTAAACACGGAATCATGTTTCAAGACATAACGACATTGTTGTTGGATCACAAGGCGTTCAAGGACACGGTCGACATTTTTGTCGATCGTTACAGAGACATGGACATTTCCGTTGTTGCCGGAGTGGAAGCAAGGGGATTTATGTTTGGTCCCTCGATTGCGTTGGGCATTGGTGCAAAGTTTGTTCCTTTACGCAAGCCTCGGAAGCTGCCAGGTGAAGTGATTTCAGAAAACTATTCTCTAGAATACGGAAACGATTGTTTGCAGCTGCATGTTGGTGCTGTCCAGCCTGGGGAACGGGCCATAGTTATTGACGACCTGGTGGCCACAGGTGGAACTCTAAAAGCAGCAATAAGACTTTTAGAACGTGCTGGTGCTGAAGTAGTGGAATGTGCTTGTGTGATTGGGGTGCCAGAGGTTAAGGGACACTGCAGGCTCATTGGAAAGCCACTTTATGTCCTTGTGGAGCCGCGTCAAGTCGATAAATGTTCGAGATGTGATGTTGATTCTTCCTTTGGCTTACATGTGGAAGTTCCTTCGTCTGAGAAACCAGAGGCTGTAATGTGA 648 0.4799 MFAEENGLKGDPRLQAISQAIRVVPHFPKHGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMDISVVAGVEARGFMFGPSIALGIGAKFVPLRKPRKLPGEVISENYSLEYGNDCLQLHVGAVQPGERAIVIDDLVATGGTLKAAIRLLERAGAEVVECACVIGVPEVKGHCRLIGKPLYVLVEPRQVDKCSRCDVDSSFGLHVEVPSSEKPEAVM* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0883 215 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 5-LIKE ISOFORM X1 1 198 - -
Dod09g0883 215 Gene3D - 6 184 IPR029057 -
Dod09g0883 215 TIGRFAM apt: adenine phosphoribosyltransferase 18 182 IPR005764 GO:0003999|GO:0005737|GO:0006168
Dod09g0883 215 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 1 198 - -
Dod09g0883 215 SUPERFAMILY PRTase-like 20 176 IPR029057 -
Dod09g0883 215 CDD PRTases_typeI 51 183 IPR000836 -
Dod09g0883 215 Pfam Phosphoribosyl transferase domain 56 166 IPR000836 -
Dod09g0883 215 Hamap Adenine phosphoribosyltransferase [apt]. 17 184 IPR005764 GO:0003999|GO:0005737|GO:0006168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0883 Dod-Chr9 28461828 28465882 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0883 11 183 PRT Gene Family AT1G27450 71.676 3.07e-90 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0883 K00759 - gmx:100499904 354.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod09g0883 09 28461828 28465882 Dod09g0883 09 28461828 28465882 ECH
Dod08g1696 08 40359607 40369365 Dod09g0883 09 28461828 28465882 ECH
Dod08g1696 08 40359607 40369365 Dod09g0883 09 28461828 28465882 PCT