Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0862 ATGGGAACGCCTAAACAAAACAGTGCAATGTTAGAGACATTTAAAGTGAACTACATTGGGGACTCCCCATACATTACTTGCTGCCCTTCACTCCACCACCACAAGCTCAGCCAAGATGACAAGTTCCTTTTGTTGTCTTCTGATGGACTTTACCAGTACTTTACCAATGAAGAAGCAGTTGCCAAAGTAGAGTCTTTCATCACCATGTTTCCAGACAGAGATCCTGCACAACTTCTTATTCAAGAAGCACTTAGTAGAGCTGCGAAAAAAGCTGGTATGAACTTGCATGAGTTGCTTGATATCCCACAAGGGGAAAGGCGCCTTTACCATGATGACATTTCTTGGTGTAATGAAAATAAAGGTGATGACGGTGGCTGCTTAGCCATAGAGGAAGGATTTTCTAAGGTTGTTGTCAAGCATTTTGTTTCTAGAGCTATTGTGGCACAATTTAGGGCTCATACCAGTCCAATATCTGCTTTATGTTTTGACCCAAGTAGAACACTTCTAGTTACTGCCTCAATCCATAGTAACAACATTAATATATTTCGTATTATGCCACCCTGCTCAAGGAATGGTTCAGGTTCTCAAAGCAGTGATTGGAGATGTTCTCATGTGCATTTATACAAGCTCCATCGTGGCATGACATCAGCT 651 0.4163 MGTPKQNSAMLETFKVNYIGDSPYITCCPSLHHHKLSQDDKFLLLSSDGLYQYFTNEEAVAKVESFITMFPDRDPAQLLIQEALSRAAKKAGMNLHELLDIPQGERRLYHDDISWCNENKGDDGGCLAIEEGFSKVVVKHFVSRAIVAQFRAHTSPISALCFDPSRTLLVTASIHSNNINIFRIMPPCSRNGSGSQSSDWRCSHVHLYKLHRGMTSA 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0862 217 SMART WD40_4 143 183 IPR001680 GO:0005515
Dod09g0862 217 ProSiteProfiles PPM-type phosphatase domain profile. 1 120 IPR001932 -
Dod09g0862 217 Pfam Protein phosphatase 2C 21 89 IPR001932 -
Dod09g0862 217 SUPERFAMILY PP2C-like 19 114 IPR036457 -
Dod09g0862 217 Gene3D - 2 116 IPR036457 -
Dod09g0862 217 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 3 114 - -
Dod09g0862 217 PANTHER PROTEIN PHOSPHATASE 2C 3 114 IPR015655 GO:0004722|GO:0006470
Dod09g0862 217 SUPERFAMILY WD40 repeat-like 123 183 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0862 Dod-Chr9 27932119 27935814 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0862 1 114 PP2C-type Phosphatase Gene Family AT1G07630 67.544 5.25e-51 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0862 - K01102 gmx:100804061 199.519