Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0858 ATGGAGAAAGAAGCCGCATTCGAGGATAAAGCGGAAAACGGCGTCAAGCTCTGCGTTTTGGATTTCGACGTCGGGAACGGGAAGCAACACGCGAGCCTCCTCAACGTGCTCTTCACGCGTCTCACTGGGAAGCCAGCGACGATGAAGCTGGCCGCCGTGGCAGAGAACGACGGCCACGAGAGATTGAAGGCGGTGAGCGAGTTTCTCGAACGGCAAGCGGAGAGGCTAGGGATTAGGTTCGAGTTCAAGCTGAGATTAGGGATGGCAATGGGGGCCGAAGGCGCGGGGACCCCAGACTCGGAACCCCGCATTCGGGGATTTTTGTCCCCGCCGGGACGGGGACAAAGTTAA 351 0.5897 MEKEAAFEDKAENGVKLCVLDFDVGNGKQHASLLNVLFTRLTGKPATMKLAAVAENDGHERLKAVSEFLERQAERLGIRFEFKLRLGMAMGAEGAGTPDSEPRIRGFLSPPGRGQS* 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0858 116 Pfam GRAS domain family 11 84 IPR005202 -
Dod09g0858 116 PANTHER SCARECROW-LIKE PROTEIN 8 6 84 IPR030013 -
Dod09g0858 116 MobiDBLite consensus disorder prediction 91 116 - -
Dod09g0858 116 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 6 84 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0858 Dod-Chr9 27039444 27041688 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0858 19 91 GRAS Transcription Factor Family AT5G52510 38.372 2.75e-10 54.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Dod09g0858 GRAS 2e-11 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0858 - - vra:106769615 86.2705