Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0853 ATGGCGGAGCAGACGGAGAGGGCCTTCCTGAAGCAACCCAAGGTGTTTCTCTGCTCGAAGAAGTCCGGCAAAGGGAAAAGGCCTGGGAAGGGAGGGAACAGGTTCTGGAAGAGCATTGGCTTGGGTTTCAAGACTCCCAGAGATGCCATTGAAGGGTCCTACATAGATAAGAAATGCCCCTTTACTGGCAATGTGTCGATTCGAGGTCGTATTCTTGCTGCACATATATCTCCATGTTTCCGTGTGAAGGAGGGCGACCATGTTATTATTGGGCAGTGCAGGCCTTTATCAAAGACTGTGAGGTTTAATGTGCTGAAAGTGATTCCGGCGGGGTCTTCAAGTGGTGTTAAGAAGGCTTTTACAGGAATGTGA 372 0.4946 MAEQTERAFLKQPKVFLCSKKSGKGKRPGKGGNRFWKSIGLGFKTPRDAIEGSYIDKKCPFTGNVSIRGRILAAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSSGVKKAFTGM* 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0853 123 PANTHER 40S RIBOSOMAL PROTEIN S11 FAMILY MEMBER 1 73 IPR000266 GO:0003735|GO:0005840|GO:0006412
Dod09g0853 123 Pfam Ribosomal_S17 N-terminal 4 72 IPR032440 -
Dod09g0853 123 ProSitePatterns Ribosomal protein S17 signature. 85 97 IPR019979 GO:0003735|GO:0005840|GO:0006412
Dod09g0853 123 Gene3D - 1 73 - -
Dod09g0853 123 PANTHER 40S RIBOSOMAL PROTEIN S11 FAMILY MEMBER 73 123 IPR000266 GO:0003735|GO:0005840|GO:0006412
Dod09g0853 123 PANTHER 40S RIBOSOMAL PROTEIN S11-1-RELATED 73 123 - -
Dod09g0853 123 PANTHER 40S RIBOSOMAL PROTEIN S11-1-RELATED 1 73 - -
Dod09g0853 123 Pfam Ribosomal protein S17 67 106 IPR000266 GO:0003735|GO:0005840|GO:0006412
Dod09g0853 123 Gene3D - 74 123 - -
Dod09g0853 123 SUPERFAMILY Nucleic acid-binding proteins 67 111 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0853 Dod-Chr9 26973386 26975839 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0853 1 123 Cytoplasmic Ribosomal Protein Gene Family AT5G23740 67.925 2.68e-61 183