Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0842 ATGAAGTTAATCGACGACGACGGTGGCGCCGGTGGCCGGAAAGTATTGGTCGGAGTGAAATTGGACCCTCGCAGCCGTGAATTGCTGACGTGGGCTCTTGTCAAGGTGGCGGTTCCCGGCGACACCGTCATTGCGCTTCACGTACTCGACACCATCACTGAAGGAACAGCATCGCTGCTATCTCTCGTGAAGACATTCGATTCCGTTCTCTCCGTATACGAAGGCTTCTGCAATTTAAAGCAGGTTAATCTGAAGCTGAAAGTGTGCAGAGGCGAATCGGCCCGGAAGGTTCTGGTGCAGGAAGCGACGTCGTTTGGCGCTGCGACGGTGATACTCGGAACTTCCAAAACGCACCACGCTATCCGGTCTCGTGCATCGGTTGCCAAGTACTGCGCCAAGAAATTGCCCAAGTGTGTCTCTGTCTTCGCTGTTGATAATGGCAAAATCGCCTTCCGCAGAGAAGCTTCTAGAACGTGCGCTGATCAAGAGAAATTACATGAAGTTCCACACTTGTTGCCAAAGTCGTTGGTGGCTTGTGGCTCGAGAAACCTGAGGAGTTGTGAGAGTTGTGAACGGGTGGTGGCGCCGCAGGAGGGTTCTGGAACTGATGATCTTAAGCAAGGTTTGCCTGAGGGTCATGCAAATGAAAATTCTCTGGCTTTGGTGCCGTATGGGAAAGTTGATGATGGTCCTTCTCCTTGTTATTCGATCGTGGTGAGGAGTTCAAACCAGTCGAAACCTGGTTGGTCGCTCCTTCGCCAGGTGTTTCACCCCAAAAAGCATAACCCCAAGTCTTCACTGAAAAATACAATTGTTTTTCAGCGCCCTTTGAGACAGGCCAGTTGGCATTCTTCGGCTGTAGTCCACCCAGATCACAAACAGACAAATATTGATGTCCAGAATGATGGTTCCACCCTTGATGGGGAGAGTGGTGCCATTGTTCCATTTGGATCTGCTGCTACCTTTCTTTTTCCCTCCCTTTGCATTGACTTGAGTAGCCCTCCTGCAGAATTGTTGGACCTGCAAGAGAAGTACTCATCTTCATGCAGGTCATATAGTTTGCAAGAACTTGCATCTGCAACAGCTAACTTCTCACCTGAAAATTTGGTTGGCAGAGGTGGTAGTAGTTATGTTTACAGAGGATGTCTTCTGGATGGCAAGGAATTGGCTGTGAAGATTTTGAAGCCGTCTGAAGATGTGGTGAAAGAGTTTGTTCAGGAAATTGAGATCCTTACAACTTTGGATCACAAGAACATAATATCTCTATCTGGATTTTGTTTTGAGGGCAACCATTTACTACTGGTTTATAATTTTCTGTCAAGGGGAAGCCTAGAAGAAAACCTTCATGGCAATAAGAAGGACTGGAATGCATTTGGCTGGCAAGAGAGGTACAAGGTGGCTGTGGGTGTAGCTGAGTCATTGGACTATCTGCACAACAGCTGTGCACAGGCTGTGATCCATAGGGATGTAAAATCTTCAAATGTCCTTCTTTCAGAAAATTTTGAGCCTCAGCTCTCGGATTTTGGACTGGCCAGTTGGGGTTCTTCTTCTTCGCATATTACTTGTACTGATGTGGCCGGAACTTTTGGATACCTAGCTCCTGAATACTTCATGCATGGTAGAGTCACTGACAAAATTGATGTATATGCTTTTGGTGTTGTACTCCTTGAGCTTCTCTCAAATAGGAAGCCCATTAACAATGAATGTCCAAAGGGCCAGGAGAGCCTTGTTATGTGGGCAACACCAATTTTGAAAGGTGGGAAGCTATCCCATTTGCTTGATCCAAGCCTGGGAAGTGAATACGACCATTGCCAGATCAAAAGAATGGTTTTGGCTGCTACTCTTTGCATTAGACGAGCACCTAAATTGCGACCTCAAATTAGCCTTATATTGAAACTTCTGCATGGTGATGAAGAAGCTATAAGATGGGCAGAGCAAGAAGTTAATGTGCCAGAGGATCTTGATGGACTTGATGGGGAATCAGTACCAAGTAATATTCAATCCCATCTTAACCTTGCGTTGCTGGATGTGGAAGATGATGCAGTTTCTATCAGTAGCACCGAGCAGAATGTCTCATTAGAAGACTATTTGCACGGAAGATGGAGTCGCTCTTCAAGTTTTGACTAA 2127 0.4645 MKLIDDDGGAGGRKVLVGVKLDPRSRELLTWALVKVAVPGDTVIALHVLDTITEGTASLLSLVKTFDSVLSVYEGFCNLKQVNLKLKVCRGESARKVLVQEATSFGAATVILGTSKTHHAIRSRASVAKYCAKKLPKCVSVFAVDNGKIAFRREASRTCADQEKLHEVPHLLPKSLVACGSRNLRSCESCERVVAPQEGSGTDDLKQGLPEGHANENSLALVPYGKVDDGPSPCYSIVVRSSNQSKPGWSLLRQVFHPKKHNPKSSLKNTIVFQRPLRQASWHSSAVVHPDHKQTNIDVQNDGSTLDGESGAIVPFGSAATFLFPSLCIDLSSPPAELLDLQEKYSSSCRSYSLQELASATANFSPENLVGRGGSSYVYRGCLLDGKELAVKILKPSEDVVKEFVQEIEILTTLDHKNIISLSGFCFEGNHLLLVYNFLSRGSLEENLHGNKKDWNAFGWQERYKVAVGVAESLDYLHNSCAQAVIHRDVKSSNVLLSENFEPQLSDFGLASWGSSSSHITCTDVAGTFGYLAPEYFMHGRVTDKIDVYAFGVVLLELLSNRKPINNECPKGQESLVMWATPILKGGKLSHLLDPSLGSEYDHCQIKRMVLAATLCIRRAPKLRPQISLILKLLHGDEEAIRWAEQEVNVPEDLDGLDGESVPSNIQSHLNLALLDVEDDAVSISSTEQNVSLEDYLHGRWSRSSSFD* 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0842 708 Gene3D HUPs 12 145 IPR014729 -
Dod09g0842 708 Pfam Protein kinase domain 367 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g0842 708 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 9 702 - -
Dod09g0842 708 Gene3D Transferase(Phosphotransferase) domain 1 439 650 - -
Dod09g0842 708 Pfam Universal stress protein family 13 139 IPR006016 -
Dod09g0842 708 ProSitePatterns Protein kinases ATP-binding region signature. 370 392 IPR017441 GO:0005524
Dod09g0842 708 PANTHER OS01G0253100 PROTEIN 9 702 IPR045271 GO:0004714|GO:0006468
Dod09g0842 708 SMART serkin_6 364 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g0842 708 CDD USP_Like 14 139 - -
Dod09g0842 708 Gene3D Phosphorylase Kinase; domain 1 336 438 - -
Dod09g0842 708 ProSitePatterns Serine/Threonine protein kinases active-site signature. 485 497 IPR008271 GO:0004672|GO:0006468
Dod09g0842 708 SUPERFAMILY Protein kinase-like (PK-like) 345 634 IPR011009 -
Dod09g0842 708 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 13 141 - -
Dod09g0842 708 ProSiteProfiles Protein kinase domain profile. 364 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0842 Dod-Chr9 26710303 26713432 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0842 352 640 Trihelix Transcription Factor Family AT5G38560 41.077 4.01e-70 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Dod09g0842 Pkinase 1.4e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0842 - - adu:107463283 1114.75