Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0821 ATGCAGGGTGAATTAGTGTTGCCAGCTGGGTTCAGATTCCACCCCACGGACGACGAATTGGTGAACCATTACTTGTGCAGGAAATGTGCTGCCCAATCCATCGCTGCCCCTATCATCAAAGAGATCGATTTGTACAAGTTTGATCCATGGCAGCTTCCAGAGATGGCGGCTTACGGTGAGAAAGAATGGTACTTCTTTTCTCCTCGGGACCGGAAGTACCCGAACGGTTCGCGGCCTAACAGAGCGGCCGGGTGCGGGTACTGGAAGGCTACCGGAGCCGACAAACCAATAGGGAAGCCGAAGGCGCTAGGGATAAAGAAGGCGCTGGTGTTCTATGCCGGCAAAGCCCCAAAAGGTGTCAAGACAAATTGGATCATGCACGAATATCGCCTTGCCAATGTTGACAGATCCGCCGCCAACAAAAACCACAACAACAACAACAACAACAACTTGAGGCTTGATGATTGGGTGTTGTGCCGGATTTACAACAAGAAAGGGAAGATTGAGAAATACAACGGCGGCACCGCCAACTCCACCTTGACGGTGGATCAGAAGTTTGGACCCAAGTTTTCAGGGGTGGTTGATTATGAGCATGAGATGAAGCCGCAGATCCACAAATTCTCCAACGACCAATTGTACATGGACACGTCTGATTCCGTGCCGAGGTTGCACACGGACTCCAGCTGCTCCGAGCACGTGGTTTCGCCGGATGTCACGTGCGAGAAGGAGGTACAGAGCCAGCCAAAGTGGAGTAATGAGCTTGACATGCAGCTGTTTGATGCATTTGATTTTCAGCTCAACTACTTGGAGGATAACATTAACAATAGCCTTTCTATGGATGACCCTTTTGGGACTCAGGATCAGTTCCAAATCAACCAGTTTCCCCCCTTCCAGGACATGTTCACGTTTGAACAGAAGCCATTTTGA 927 0.5016 MQGELVLPAGFRFHPTDDELVNHYLCRKCAAQSIAAPIIKEIDLYKFDPWQLPEMAAYGEKEWYFFSPRDRKYPNGSRPNRAAGCGYWKATGADKPIGKPKALGIKKALVFYAGKAPKGVKTNWIMHEYRLANVDRSAANKNHNNNNNNNLRLDDWVLCRIYNKKGKIEKYNGGTANSTLTVDQKFGPKFSGVVDYEHEMKPQIHKFSNDQLYMDTSDSVPRLHTDSSCSEHVVSPDVTCEKEVQSQPKWSNELDMQLFDAFDFQLNYLEDNINNSLSMDDPFGTQDQFQINQFPPFQDMFTFEQKPF* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0821 308 PANTHER NAC DOMAIN-CONTAINING PROTEIN 2-LIKE 5 283 - -
Dod09g0821 308 ProSiteProfiles NAC domain profile. 7 164 IPR003441 GO:0003677|GO:0006355
Dod09g0821 308 PANTHER NAC TRANSCRIPTION FACTOR 56 5 283 - -
Dod09g0821 308 Pfam No apical meristem (NAM) protein 8 131 IPR003441 GO:0003677|GO:0006355
Dod09g0821 308 Gene3D NAC domain 16 169 IPR036093 GO:0003677|GO:0006355
Dod09g0821 308 SUPERFAMILY NAC domain 3 164 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0821 Dod-Chr9 26110325 26111622 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0821 1 308 NAC Transcription Factor Family AT1G01720 59.744 6.77e-120 344
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dod09g0821 NAM 2.8e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0821 - - adu:107463232 474.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod09g0821 09 26110325 26111622 Dod09g0821 09 26110325 26111622 ECH
Dod04g2570 04 49609055 49611089 Dod09g0821 09 26110325 26111622 ECH
Dod04g2663 04 50542317 50544149 Dod09g0821 09 26110325 26111622 PCT