Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0766 ATGACTCTTCTGAGGTTGATTAGCTTCGTGCTCCTCCTCACCACAGTAGTTGCACAATCGCCAATTTCATTGTACACTTATTGCGGAAACTCAACAGGAGGAAAAAATCTCAGCGCACCATACGAAACCAACCTCAAGAGTCTCCTCTCATGGATAATCTCCGATTCAGACACAAGCGGCGGTTATAACAACACAAGAATAAGCACCAACAACAGCGATAGCGACGTTTACGGGTTCTATGAGTGCAGGGGCGACGTCACGGGATACTTCTGTCAGTTCTGTCTCAATTCTGCCGTCCAATCACTAAGTCAGCGCTGTCCCAACGGCGTCTCTGCCATTGCATGGTACGACAGTTGCATCATTCGTTACTCCAACGAGAGCTTCGTTGGCAAAATTAGCGTCAGCCCAGCGTGGAACAGCACAGGAACGGAGCCGATAAAGGATCAGAAAGAGCTTCACGAAGGTTTGGATTCTATGAAGAGTTTGGTGACGAAAGCTGCGGAGGCTGAGCAGCTGTGGGATTACGGGGAGTTCGACTGGAGTGACGGTGAGAAAAGGTACGGGGTGGCGCAATGCGGGAGAGACCTTGACAGAGATGCGTGTAAAGAGTGTCTGGGGGAGCTGTTAGACATGGTCCCGGTGTGTTGTGGGACGAAGACGACATGGTCGATTATGGCTCCGAGCTGTGGGATGAAATTCGATGATCATAGGTTCTACGAGGTTAATGGTCAACCAGGGTCGTCTTCTCCTAGTCCAAGTCCAGCCAAGCAGGAAGGATCAAGTCATTCTAAAACCATAACCATCATCATCGTAACTGTGTTGGTGACAGTAGCTCTACTCATTGGCTGTGGCTACTACTTCTGGGACAAAATTGGGTTATTCAAAGATCGATCACCGTTCCAGGAAATTCCTATAGCTCTTCATGACCATGCTCAAAGAGAGGACTCATTGAATGCAGACCTTCCTACAATACCTTTAGTTGTGATTCAACAGACAACAAATCACTTTTCACTGTCATCTAAATTAGGAGAAGGTGGATTTGGCCCTGTTTACAAGGGAACATTACTAGATGGGACAGAAATTGCTGTAAAAAGGCTCTCCGAAACATCCGGTCAAGGTTTAGTGGAGTTCAAGAATGAAGTCATCTTCATAGCTAAATTGCAACATAGAAACCTTGTGAGACTCTTGGGCTGCTGCATTGAAGAAAATGAGAAGTTGCTTGTATATGAGTTCATGCCAAATTCTAGCCTCGACTTTCACCTATTCAATGAGGAAAGACGAAAGCGACTAGATTGGAAATTAAGACTAAGCATTATCAATGGAATTGCAAGAGGACTGCTATACCTTCATGAGGATTCTCGACTTAGAGTAATTCATAGAGACCTTAAAGCCAGCAATGTTCTTCTTGACCATGAGATGAATCCAAAAATATCAGACTTCGGATTGGCAAGGACATTTGAAAGAGGCAGTATTCAGGGACAGACGAAAAGAGTTATTGGTACATACGGATATATGGCTCCAGAATATGCTATGGCAGGGTTATTTTCAGTGAAATCTGATGTTTTTAGCTTTGGAGTTCTTCTACTAGAAATCATCTGTGGAAAAAGGAATAGTGAATTCTATCTTTCAGAACATGGGCAAAGTCTTCTGTTACATACTTGGAGACTTTGGTGTGAAGGAAGAAGTTTGGAATTGACAGATCCAGTGCAGGAAAATTCATACAATGCAAGTGAAGTCATGAAGTGCATACACATTGGCTTGTTGTGTGTGCAGGAAGATGCAGCAGACCGACCGACCATGTCCACAGTTGTTCTCATGCTGGGGAGTGAAACAATGGCCCTTCCCGAGCCCAAGCAACCAGCATTTTCAGTTGGAAGAATGCATAGTGAAGATGATTACACATCCAAAAATTCTAAGGATAATTCTGTTAATGAAGTAACAGTAACTAATGTTACACCCAGATAG 1965 0.4427 MTLLRLISFVLLLTTVVAQSPISLYTYCGNSTGGKNLSAPYETNLKSLLSWIISDSDTSGGYNNTRISTNNSDSDVYGFYECRGDVTGYFCQFCLNSAVQSLSQRCPNGVSAIAWYDSCIIRYSNESFVGKISVSPAWNSTGTEPIKDQKELHEGLDSMKSLVTKAAEAEQLWDYGEFDWSDGEKRYGVAQCGRDLDRDACKECLGELLDMVPVCCGTKTTWSIMAPSCGMKFDDHRFYEVNGQPGSSSPSPSPAKQEGSSHSKTITIIIVTVLVTVALLIGCGYYFWDKIGLFKDRSPFQEIPIALHDHAQREDSLNADLPTIPLVVIQQTTNHFSLSSKLGEGGFGPVYKGTLLDGTEIAVKRLSETSGQGLVEFKNEVIFIAKLQHRNLVRLLGCCIEENEKLLVYEFMPNSSLDFHLFNEERRKRLDWKLRLSIINGIARGLLYLHEDSRLRVIHRDLKASNVLLDHEMNPKISDFGLARTFERGSIQGQTKRVIGTYGYMAPEYAMAGLFSVKSDVFSFGVLLLEIICGKRNSEFYLSEHGQSLLLHTWRLWCEGRSLELTDPVQENSYNASEVMKCIHIGLLCVQEDAADRPTMSTVVLMLGSETMALPEPKQPAFSVGRMHSEDDYTSKNSKDNSVNEVTVTNVTPR* 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0766 654 Gene3D Phosphorylase Kinase; domain 1 304 411 - -
Dod09g0766 654 SMART serkin_6 336 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g0766 654 ProSiteProfiles Gnk2-homologous domain profile. 22 128 IPR002902 -
Dod09g0766 654 Gene3D Transferase(Phosphotransferase) domain 1 412 617 - -
Dod09g0766 654 Pfam Protein tyrosine and serine/threonine kinase 337 605 IPR001245 GO:0004672|GO:0006468
Dod09g0766 654 MobiDBLite consensus disorder prediction 616 654 - -
Dod09g0766 654 MobiDBLite consensus disorder prediction 242 260 - -
Dod09g0766 654 MobiDBLite consensus disorder prediction 639 654 - -
Dod09g0766 654 Gene3D - 22 128 IPR038408 -
Dod09g0766 654 Gene3D - 138 238 IPR038408 -
Dod09g0766 654 MobiDBLite consensus disorder prediction 241 260 - -
Dod09g0766 654 ProSiteProfiles Protein kinase domain profile. 336 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g0766 654 Pfam Salt stress response/antifungal 28 125 IPR002902 -
Dod09g0766 654 Pfam Salt stress response/antifungal 159 235 IPR002902 -
Dod09g0766 654 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 13 652 - -
Dod09g0766 654 CDD STKc_IRAK 342 607 - -
Dod09g0766 654 SUPERFAMILY Protein kinase-like (PK-like) 321 632 IPR011009 -
Dod09g0766 654 ProSitePatterns Serine/Threonine protein kinases active-site signature. 457 469 IPR008271 GO:0004672|GO:0006468
Dod09g0766 654 ProSiteProfiles Gnk2-homologous domain profile. 132 238 IPR002902 -
Dod09g0766 654 Pfam Domain of unknown function (DUF3403) 609 654 IPR021820 GO:0004674
Dod09g0766 654 PANTHER PROTEIN KINASE DOMAIN 13 652 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0766 Dod-Chr9 19522754 19526625 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0766 9 654 Receptor kinase-like Gene Family AT4G05200 39.403 7.54e-168 494
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dod09g0766 PK_Tyr_Ser-Thr 2.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0766 - - pvu:PHAVU_011G194700g 742.651