LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dod09g0760	ATGGACGCGAGAAACCCGTTTGAGAACTTCCCCAATCTCGACCCTCCGCGTCACATGAACAGCTCGTCATCACGCAGAAGTGCTGCTCTATCCATTCAGTCCAGAAGCTCCTGCAGGAACTCAACCCGGGAACGGGAAGTGACTTTCGGGCACTCGGACTCCAAGCCTGCGAGGTATGGGTCAAGGGGTGCTGCTGATTACTCGGAAGCCTGCAGCATGTCCCAGAAGGAAATCAGTGACGAGGATGCCAGATTGGTTTATATTGATGACCCCGAGAGGACAAACGAGAGGTTCGAATTCGGTGGGAACTCGATTCGCACTGGCAAGTACTCGCTACTCACTTTCCTCCCAAGGAACATGTTCGAGCAGTTCCACAGAGTTGCCTACATTTACTTCCTCATAATCGCCATTCTCAATCAGGTCCCTCAGCTCGCAGTTTTCGGGAGGGGCGTTTCCATCTTGCCGCTGGCCTTCGTCCTGTTCGTCACCGCCGTGAAGGATGCGTTTGAGGACTGGAGGAGGCACAAGTCCGACAAAGTCGAGAACAACAGGTTGGCGTCTGTTTTGGTCGGCGGTCAGTTTCAAGGGAAGAAGTGGAAGGATGTTAGGGTCGGGGAGATTGTTAAGATCAGTGCGAATGAAACCATTCCTTGTGATATTGTGTTGCTGTCGACTAGTGACCCTTCTGGGGTTGCTTACGTGCAGACTATTAATCTAGATGGGGAGTCTAATTTGAAGACTAGGTATGCGAAGCAAGAGACTCATTCGAAGGTTCCTGAGAAGGTGAGGTTTAGTGGGTTGATTAAGTGTGAGAAACCCAATAGGAACATATATGGGTTTCAGGCTAACATGGAAATTGATGGTAAGAGGTTGTCCCTTGGGTCTTCAAATATTGTCCTTAGAGGGTGTGAACTCAAGAATATTAACTGGGCAATTGGTGTTGCTGTGTATTGCGGCCGCGAGACCAAAGCTATGCAAAACAGCGCGGGAGCTCCCTCTAAGAGGAGCCGGCTCGAGACTCAAATGAACTTGGAGATCATTTTGCTCTCTGTGTTTCTCGTGACTTTGTGTACGGTCACCTCGGTTTGTGCTGCCATTTGGTTGAAGCGCCACGATGAGGAGTTGGATTTGTTGCCTTATTATAGGAAACTGGATGTTTCAGAGGAGGGGCAGGCGGAAAGCTATGATTATTATGGATGGGGATTAGAAATCCTTTTCACTTTCCTCAAGTCAGTTATAGTGTTCCAGGTCATGATCCCCATATCATTGTATATTTCTGTGGAGCTTGTCCGTGTTGGTCAGGCGTACTTCATGATCCGGGATTCCAGAATGTATGATGAGGCAACAAATTCAAGATTTCAGTGTAGGGCTTTGAACATTAATGAAGACTTGGGGAAAATTAAGTATGTCTTCTCCGACAAAACCGGGACACTTACCGAGAACAAGATGGAGTTTCAAAGTGCGAGCATCTGGGGGGTTGATTACAGTAATGCAAAAGCCAGTCTAGAGAATGGGCAACAAGCTGAGTACTCTGCTCAAGTGGACGGAAAGGTTGCGAAGCCGAAGATGAAGGTGAAAGTTAATCAAGAGCTTTTGAAATTATCAAAAGGTGGATTTGGAAATATAGAGGGAAAATGGATTTATGATTTCTTTCTAGCATTGGCAGCCTGCAATACAATTGTGCCTCTTGTTGTTGACACATCTGATCCTACAGTCAAGCTGATAGACTACCAAGGCGAATCACCTGATGAACAAGCATTGGCATATGCTGCTGCTGCTTATGGCTTCATGCTTATAGAACGAACATCAGGTCACATAGTTATTGATATTCATGGAGAAAGACAGAGGTTCAATGTCTTGGGTTTGCATGAATTTGATAGTGATCGGAAGAGGATGTCAGTTCTATTGGGTTACGCCGACAATTCTGTGAAACTTTTTGTCAAGGGGGCAGATACATCCATGCTTAGTGTGATAGATAAATCAGTGAACACAGAAATATTGCAAGCAACTGAAACCCATCTTCACTCTTATTCCTCGGTGGGTTTGAGGACACTTGTTGTTGGTATACGGGACTTGAGTGCTTCAGAATTTGATCAATGGCAATTTGCCTTTGAGGCAGCAAGTACTGCTTTGATTGGTAGGGCTGATATGCTTCGCAAGGTTGCTAGCAATGTTGAGAACAATCTATGCATATTGGGTGCTACTGCTATAGAAGATAAACTGCAGCAAGGAGTGCCAGAATCGATTGAGTCTCTATGA	2259	0.4613	MDARNPFENFPNLDPPRHMNSSSSRRSAALSIQSRSSCRNSTREREVTFGHSDSKPARYGSRGAADYSEACSMSQKEISDEDARLVYIDDPERTNERFEFGGNSIRTGKYSLLTFLPRNMFEQFHRVAYIYFLIIAILNQVPQLAVFGRGVSILPLAFVLFVTAVKDAFEDWRRHKSDKVENNRLASVLVGGQFQGKKWKDVRVGEIVKISANETIPCDIVLLSTSDPSGVAYVQTINLDGESNLKTRYAKQETHSKVPEKVRFSGLIKCEKPNRNIYGFQANMEIDGKRLSLGSSNIVLRGCELKNINWAIGVAVYCGRETKAMQNSAGAPSKRSRLETQMNLEIILLSVFLVTLCTVTSVCAAIWLKRHDEELDLLPYYRKLDVSEEGQAESYDYYGWGLEILFTFLKSVIVFQVMIPISLYISVELVRVGQAYFMIRDSRMYDEATNSRFQCRALNINEDLGKIKYVFSDKTGTLTENKMEFQSASIWGVDYSNAKASLENGQQAEYSAQVDGKVAKPKMKVKVNQELLKLSKGGFGNIEGKWIYDFFLALAACNTIVPLVVDTSDPTVKLIDYQGESPDEQALAYAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFDSDRKRMSVLLGYADNSVKLFVKGADTSMLSVIDKSVNTEILQATETHLHSYSSVGLRTLVVGIRDLSASEFDQWQFAFEAASTALIGRADMLRKVASNVENNLCILGATAIEDKLQQGVPESIESL*	753

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dod09g0760	752	MobiDBLite	consensus disorder prediction	15	38	-	-
	Dod09g0760	752	Pfam	Phospholipid-translocating ATPase N-terminal	86	152	IPR032631	-
	Dod09g0760	752	Gene3D	-	474	739	IPR023299	GO:0000166
	Dod09g0760	752	MobiDBLite	consensus disorder prediction	1	62	-	-
	Dod09g0760	752	SUPERFAMILY	Calcium ATPase, transmembrane domain M	94	549	IPR023298	-
	Dod09g0760	752	ProSitePatterns	E1-E2 ATPases phosphorylation site.	473	479	IPR018303	-
	Dod09g0760	752	Pfam	Cation transport ATPase (P-type)	580	656	-	-
	Dod09g0760	752	SUPERFAMILY	Metal cation-transporting ATPase, ATP-binding domain N	477	744	IPR023299	GO:0000166
	Dod09g0760	752	SUPERFAMILY	Calcium ATPase, transduction domain A	183	327	IPR008250	-
	Dod09g0760	752	Gene3D	-	160	329	-	-
	Dod09g0760	752	CDD	P-type_ATPase_APLT_Dnf-like	102	752	-	-
	Dod09g0760	752	Pfam	E1-E2 ATPase	186	429	-	-
	Dod09g0760	752	PANTHER	PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE	6	752	-	-
	Dod09g0760	752	PANTHER	PHOSPHOLIPID-TRANSPORTING ATPASE	6	752	-	-
	Dod09g0760	752	TIGRFAM	ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase	100	752	IPR006539	GO:0000287\|GO:0005524\|GO:0015914\|GO:0016021\|GO:0140326

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dod09g0760	Dod-Chr9	19072634	19079339	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dod09g0760	1	752	Primary Pumps ATPases	AT5G04930	66.888	0.0	1033

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Dod09g0760	K14802		-	gmx:100784988	1189.48