Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0736 ATGGAAGGAGGGTTATACCAAAACTCAGTTTCTCCCTCAGTTTCCATTGATAAGTCAAGGATTCTAGACGTTAAACCTCTGCGTAGTTTGGCCCCTGTGTTTGCAGAATCTTCTAGAGCTTCTCCCTCTGGCCAGTACCCATCTGGATTTTCTCCATTTTTGCCTTTTAGTGAGCCTCATGAATCTGAAGCATCTACTGCTCCTGCACCTGCACCAGCTCCAGCTCCAGCTCCCATACCAGCTCCAACTCCACTGAGGTTTAGGAGTCCACTAGTTGAAGAACCAACCCCTTATGGAGCCAATGGAGACACTTCTTCATCAATAGAGGGGCTCAATGGTGTTTCTAACGAGCAAAAGCGTGCAGCACCAAATGTGCGCAGCTGCAAATCATCCCAGAAGAGGAACAAGTCAAGTCAGGAACCGGGAGTCGGTTCGAGTTCATTCGTTGGTATTAGCCCATACAAGAAGGATGATGGTGACCGCGACGTGGTTCATGTCGTACTCATGACATTTGATGCGCTTCGAAGAAGGATCTGCCAACTAGAAGATGCTAAGGAATTGAACATAAATGGTTTTATCAAGCGTGCAGATTTGAGAGCTAGCAATGCTTTGACGCTTAAAGGGATTCGAACAAACATGAGGAAGAGAGTAGGAGCAGTGCCTGGGGTTGAGATTGGGGACATTTTCTTCTTGCGGATAGAATTGGTTCTTGTGGGTTTACATGGCCAGTCTATGGGTGGAATCGACTACATGACTGTCAAGGGTGAATTTCAGGAGGAACCATTGGCTTTAAGCATCGTTTCATCTGGAGAATATGATGATGATGCAGAGGATGATGATATTTTGGTGTATAGTGGTCAGGGTGAGCATTTTAACAAGAAAGACAAGCACGTGACTGATCAGAAGCTTCAAAGAGGTAACCTTGCTTTGGATAGAAGTTCAAAACGACACAATGAAGTAAGAGTCATCCGGGGGTTGAGAGACGCTGTGAATAAAAATGTGAAAATATATGTCTATGATGGTTTGTATAAAATCCAAGATTCCTGGATAGAAAGGGGGAAATCTGGTGGTGGCGTGTTCAAGTATAAGTTTGTGAGACTGCCTGGACAGCCCAGTGCTTTTGCCGTTTGGAAATTGGCTCAAAAGTGGAAGGCAGGCTCCCCTTCAAGGAATGGCCTTATTATTGCAGACATCTCCTCAGGAGCTGAGAGTATTCCTGTATCGCTTGTCAATGATGTTGATGATGAGATGGGTCCTGCTTTTTTCACTTATTTCCAGTCTCTCAGGCATACAAAGCCTTATGGTTCAACGGTGCCTTCGTATGGGTGCAACTGTAACAAAGCATGTGTCCCGGGTGATCTGAGTTGCTCTTGCATTCAGAGAAATGGAGGTGATTTTCCATATACTGCAAATGGCATTATTGTGAGTCGAAGGCCACTGGTTCATGAATGTGGCCCGATGTGTCGCTGTCTTCCTAACTGCAAAAATCGAGTATCCCAGGCTGGTTTGAAGCACTACGTGGAAGTGTTCAAAACAAAGGATAGAGGGTGGGGTCTTCGATCACTGGATCCCATTCGTGCTGGTACTTTTATTTCTGAGTATGCAGGAGAAGTTGTTGACAGTGCCAATTTAAGTCTGAATGGAAAGGATGGAGATGATGATGAGTACATTTTTGATACAAGCCGTATTTATGAACCATTCAAGTGGAATTACGAACCTAGCTTGCTGGAAGAAGGGAGTTCAAGTGACTGTAGCGAGGATTATGCTATACAATCTCCTCTAATTATCAATGCCAAAAATGTTGGAAATGTGGCTAGGTTCATGAATCATAGTTGCTCCCCAAATGTTTTCTGGCAGCCAGTCTTATATCAAGAAAACAATCAGTCCTTCCTTCACATCGCATTTTTTGCTCTTAGGCACATTCCTCCACTGACAGAGTTAACATATGATTATGGTATTGTCCGCTCTGGTCATGCTGAGGGTAGCAGTGCAGCCAAAGGGAGAATGAAATGCTTGTGTGGATCATCAACATGCCGTGGTTCTTTCGGTTGA 2052 0.4459 MEGGLYQNSVSPSVSIDKSRILDVKPLRSLAPVFAESSRASPSGQYPSGFSPFLPFSEPHESEASTAPAPAPAPAPAPIPAPTPLRFRSPLVEEPTPYGANGDTSSSIEGLNGVSNEQKRAAPNVRSCKSSQKRNKSSQEPGVGSSSFVGISPYKKDDGDRDVVHVVLMTFDALRRRICQLEDAKELNINGFIKRADLRASNALTLKGIRTNMRKRVGAVPGVEIGDIFFLRIELVLVGLHGQSMGGIDYMTVKGEFQEEPLALSIVSSGEYDDDAEDDDILVYSGQGEHFNKKDKHVTDQKLQRGNLALDRSSKRHNEVRVIRGLRDAVNKNVKIYVYDGLYKIQDSWIERGKSGGGVFKYKFVRLPGQPSAFAVWKLAQKWKAGSPSRNGLIIADISSGAESIPVSLVNDVDDEMGPAFFTYFQSLRHTKPYGSTVPSYGCNCNKACVPGDLSCSCIQRNGGDFPYTANGIIVSRRPLVHECGPMCRCLPNCKNRVSQAGLKHYVEVFKTKDRGWGLRSLDPIRAGTFISEYAGEVVDSANLSLNGKDGDDDEYIFDTSRIYEPFKWNYEPSLLEEGSSSDCSEDYAIQSPLIINAKNVGNVARFMNHSCSPNVFWQPVLYQENNQSFLHIAFFALRHIPPLTELTYDYGIVRSGHAEGSSAAKGRMKCLCGSSTCRGSFG* 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0736 683 Pfam SAD/SRA domain 217 370 IPR003105 -
Dod09g0736 683 ProSiteProfiles Pre-SET domain profile. 441 502 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Dod09g0736 683 SUPERFAMILY PUA domain-like 201 387 IPR015947 -
Dod09g0736 683 SMART set_7 505 658 IPR001214 GO:0005515
Dod09g0736 683 MobiDBLite consensus disorder prediction 35 151 - -
Dod09g0736 683 SMART G9a_1 213 370 IPR003105 -
Dod09g0736 683 MobiDBLite consensus disorder prediction 36 50 - -
Dod09g0736 683 ProSiteProfiles Post-SET domain profile. 667 683 IPR003616 -
Dod09g0736 683 Pfam SET domain 516 652 IPR001214 GO:0005515
Dod09g0736 683 Gene3D SET domain 387 682 IPR046341 -
Dod09g0736 683 Pfam Pre-SET motif 398 497 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Dod09g0736 683 ProSiteProfiles SET domain profile. 505 652 IPR001214 GO:0005515
Dod09g0736 683 SMART preset_2 395 489 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Dod09g0736 683 Gene3D - 200 385 IPR036987 -
Dod09g0736 683 MobiDBLite consensus disorder prediction 69 85 - -
Dod09g0736 683 ProSiteProfiles YDG domain profile. 218 366 IPR003105 -
Dod09g0736 683 SUPERFAMILY SET domain 404 680 IPR046341 -
Dod09g0736 683 MobiDBLite consensus disorder prediction 99 146 - -
Dod09g0736 683 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 683 IPR025794 GO:0016571
Dod09g0736 683 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH1 14 681 - -
Dod09g0736 683 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 14 681 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0736 Dod-Chr9 17072978 17075029 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0736 17 683 Su(var)3-9 homologs AT5G04940 50.072 0.0 672
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Dod09g0736 SAD_SRA 3e-46 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0736 K24405 - gmx:100800651 978.008