Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dod09g0703 | ATGGGTTCTTCAGTTGGAGGAGGCAACAGCAACGCGGGCGTTGAGTGGCACGTGCGTCCTTCAAACCCTAAGAACCCCATCGTCTTCTTCGATGTCACCATCGGTAACATACCCGCCGGAAGAATCAAGATGGAGCTCTTTGCCGATATTGCCCCCAAAACCGCCGAGAATTTCAGGCACTTCCCTTTCTTTTTTTTTTGTATTTACCATTTTCCCCTTAAGAAAGCAGGACTACCTGTTGGTTACAAGGGTTGTCAATTTCATAGGGTGATTAAGGATTTTATGATTCAGGCTGGTGATTTTGTAAAGGGTGATGGTAGTGGATGTGTTTCCATCTATGGACACAAATTTGATGATGAAAATTTCATTGCCAAACATACTGGTCCTGGTCTTCTATCATGGTATGCAAATAGTGGACCAAACACCAACGGTTGTCAGTTCTTCATTACTTGTGCAAAATGTGACTGGCTTGACAACAAGCATGTTGTTTTTGGGAGAGTGCTTGGAGATGGTCTTTTGGTTGTCAGAAAGATTGAGAATGTGGCAACTGGACCCAATAACCGGCCCAAATTAGCTTGCGTCATTGCTGAATGTGGTGAAATGTAA | 606 | 0.4389 | MGSSVGGGNSNAGVEWHVRPSNPKNPIVFFDVTIGNIPAGRIKMELFADIAPKTAENFRHFPFFFFCIYHFPLKKAGLPVGYKGCQFHRVIKDFMIQAGDFVKGDGSGCVSIYGHKFDDENFIAKHTGPGLLSWYANSGPNTNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACVIAECGEM* | 202 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dod09g0703 | 201 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE H | 19 | 201 | - | - | |
| Dod09g0703 | 201 | ProSiteProfiles | Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. | 29 | 200 | IPR002130 | GO:0000413|GO:0003755 | |
| Dod09g0703 | 201 | SUPERFAMILY | Cyclophilin-like | 16 | 201 | IPR029000 | - | |
| Dod09g0703 | 201 | PIRSF | Peptidylpro_ismrse | 15 | 201 | IPR024936 | GO:0003755 | |
| Dod09g0703 | 201 | Gene3D | - | 15 | 201 | IPR029000 | - | |
| Dod09g0703 | 201 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 146 | 158 | IPR002130 | GO:0000413|GO:0003755 | |
| Dod09g0703 | 201 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 159 | 174 | IPR002130 | GO:0000413|GO:0003755 | |
| Dod09g0703 | 201 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 46 | 61 | IPR002130 | GO:0000413|GO:0003755 | |
| Dod09g0703 | 201 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 87 | 99 | IPR002130 | GO:0000413|GO:0003755 | |
| Dod09g0703 | 201 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 131 | 146 | IPR002130 | GO:0000413|GO:0003755 | |
| Dod09g0703 | 201 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 19 | 201 | - | - | |
| Dod09g0703 | 201 | ProSitePatterns | Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. | 82 | 99 | IPR020892 | GO:0003755|GO:0006457 | |
| Dod09g0703 | 201 | Pfam | Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD | 30 | 199 | IPR002130 | GO:0000413|GO:0003755 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Dod09g0703 | Dod-Chr9 | 15206745 | 15219317 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Dod09g0703 | 40 | 199 | U-box Gene Family | AT5G67530 | 40.373 | 1.40e-23 | 95.9 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Dod09g0703 | K09567 | - | zju:107428673 | 356.681 |