Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0687 ATGGCAAAAATAAGAACAGGAAGACTGCTGCATGGTGTTCTTCACTTCACAATTTTTGAAGTTGATAAGCTCTACGGGAATGATTGCTGCAACTGTTTCTCCAAGCTTTTGGAAGAATCTTTTCCAAATGGAAAAAGTGCTGCCAGACTATACGCAACCATTAAGTTAGGCAATGTTACAGTTGGCAGAACTAGAGTTATAAACAACGGACACTCTCATCTTCAGTGGAATGAATCTTTACAAATTTACACTGCTCACGTTGCGAGCGATGTTGTTTTTCGTATCAAAGAAGATGAACCAATTGGGGCAAAAGTGATAGGAAGAGCATATTTGCCCGTCGAAGAGTTAGGAAACGGACAAACTCTAGATAGATGGGTTCAGATTTTGAATAGGAAACATAAACCTCTTAAAGGAGGGCCTAGAATTCATGTGCAGTTAAAGTTTTTTGACGTCACCCAGGACATTAACTGGTCTCAAGGAATTAAGAGTCCTAATTTCCCAGGACTCAGACACACATACTTTACTCAGAGAAGCGGTTGCAGAGTCACACTTTACCAGGATGCTCATATTCCAGACACATTTTCCCCAAAAATCCTCCTCACTGGAGGCAACTATTATGAACCACGCCGATGTTGGGAAGATGTTTTTGATGCAATTTCCAGGGCAAAGCACTTGGTATATATAGCAGGATGGTCTGTTTTCACCGAAATTACTCTGATTAGGGAGTTGAGTTGGAGAAAGGCGGGAAGTGATTTGACACTTGGGGAGCTTCTTAAAATGAAGGCTGGTGAAGGAGTCACGGTCCTAATGCTTGTCTGGGATGACAGGACTTCAGTAAAGTGGCTAAAGAATGATGGAGTGATGACTACTCATGATGAAGATACAGAAGGTTACTTCCGTGGAACTGGAGTGCACTGTGTACTGTGCCCTCGTAATCCCGATAATGGGGAAAGCCTTGTCCAGGGCATAGAGGTTGCCACCATGTTCTCACATCACCAGAAAATCGTAATCGTTGATAGTGAGATGCCAAATGGGAATTCAGATAGGAGGCGGAGAATTTTGAGCTTCATCGGTGGTATTGATCTGTGTGATGGAAGATATGACACCCCTGTGCATTCCATTTTCAGGACGCTGGGGACAGTACACCATGATGATTTTCACCAACCAAATTTCAAAGGCGCCTCAATTGCTAAAGGTGGACCGAGAGAGCCTTGGCATGACATACACTGCCGCTTAGAAGGAGCAGTTGCCAGGGATGTTCTAACCAATTTTGAGCAGAGGTGGAAGAAGCAAGGTAAGAAAGATGTCTTACCCGTTGAACTTGGACAACTTGCTGACACTTTCATTCCTGCATCCCTGGAAACGTTCTCTGCCGGAGACGAAGAAGAGACATGGAATGTTCAGGTGTTTCGATCCATTGATGGAGGAGCTGCTTTTGCCCTCCCAAATACTAAAGAGGAAGCGGCCAGGTGCGGTCTTTTGAGTGGGAAAGACCATGTCATTGACTGCAGCATCCAGAATGCTTACATTAATGCAATCAGGAGAGCCAAAAAGTTCATCTACATAGAAAACCAATATTTCCTTGGAAGCTCTTTCTGCTGGAATTCCGACGAGCTCCAGGGGGAGGAGGTGGGAGCTTTGCATCTGATTCCCAAGGAACTGTCTCTGAAGATTGTTAGCAAGATTGAAGCTGGAGAGAGATTCGCTGTCTATATAGTGATCCCAATGTGGCCAGAGGGTATTCCTGAAAGTAATTCTGTTCAGAGCATATTGAATTGGCAAAAATGGACGATCGATATGATGTACACTGATGTAGTTCAAGCTCTAAAAGCCAAAGGGATTAATGATGCGGATCCAAAAGACTATTTGAGTTTCTTTTGCCTTGGAAATCGTGAGACGTACAGTGATGGAGAATATGAACCTTCTAAAAAGCCCGCACGAGAATCGGATTACGACAGAGCACAAACAGCTAGGAGATTCATGATCTATGTACATGCCAAAATGATGATAGTTGACGATGAATACATAATTATTGGATCTGCCAACATGAATCAGCGGTCAATGGATGGAGCTAGGGATACAGAGATAGCGATGGGAGGCTACCAACCAAATCACATAGCAACAAATCAGCCAGCCAGGGGTCAGATACATGGCTTTAGAATGGCATTGTGGTATGAGCACTTAGGCTTTCTAGATGGCTCCTTTCTTGCTCCAGAGAGTTTGCAATGTATCAGGCAAATAAACCATATCTCAGAAAGGTACTGGGACCTCTACTGCAGTGAGACTTTCGATGATGAAATGCATGGACATTTGCTTAGTTATCCTATCAGAGTAACTGAAAGTGGTAAGGTCACTACCCACCCTGGGGTGGAGTACTTCCCTGACACGAAGGCGGGAATTCTAGGGACCAAATCTGAACTTCCATCTATTCTAACTACTTAA 2442 0.4382 MAKIRTGRLLHGVLHFTIFEVDKLYGNDCCNCFSKLLEESFPNGKSAARLYATIKLGNVTVGRTRVINNGHSHLQWNESLQIYTAHVASDVVFRIKEDEPIGAKVIGRAYLPVEELGNGQTLDRWVQILNRKHKPLKGGPRIHVQLKFFDVTQDINWSQGIKSPNFPGLRHTYFTQRSGCRVTLYQDAHIPDTFSPKILLTGGNYYEPRRCWEDVFDAISRAKHLVYIAGWSVFTEITLIRELSWRKAGSDLTLGELLKMKAGEGVTVLMLVWDDRTSVKWLKNDGVMTTHDEDTEGYFRGTGVHCVLCPRNPDNGESLVQGIEVATMFSHHQKIVIVDSEMPNGNSDRRRRILSFIGGIDLCDGRYDTPVHSIFRTLGTVHHDDFHQPNFKGASIAKGGPREPWHDIHCRLEGAVARDVLTNFEQRWKKQGKKDVLPVELGQLADTFIPASLETFSAGDEEETWNVQVFRSIDGGAAFALPNTKEEAARCGLLSGKDHVIDCSIQNAYINAIRRAKKFIYIENQYFLGSSFCWNSDELQGEEVGALHLIPKELSLKIVSKIEAGERFAVYIVIPMWPEGIPESNSVQSILNWQKWTIDMMYTDVVQALKAKGINDADPKDYLSFFCLGNRETYSDGEYEPSKKPARESDYDRAQTARRFMIYVHAKMMIVDDEYIIIGSANMNQRSMDGARDTEIAMGGYQPNHIATNQPARGQIHGFRMALWYEHLGFLDGSFLAPESLQCIRQINHISERYWDLYCSETFDDEMHGHLLSYPIRVTESGKVTTHPGVEYFPDTKAGILGTKSELPSILTT* 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0687 813 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 660 687 IPR001736 GO:0003824
Dod09g0687 813 Pfam Phospholipase D Active site motif 327 366 IPR001736 GO:0003824
Dod09g0687 813 Pfam Phospholipase D Active site motif 661 687 IPR001736 GO:0003824
Dod09g0687 813 Gene3D C2 domain 9 159 IPR035892 -
Dod09g0687 813 SMART pld_4 660 687 IPR001736 GO:0003824
Dod09g0687 813 SMART pld_4 327 366 IPR001736 GO:0003824
Dod09g0687 813 SUPERFAMILY Phospholipase D/nuclease 152 438 - -
Dod09g0687 813 CDD C2_plant_PLD 8 149 - -
Dod09g0687 813 SMART C2_3c 13 125 IPR000008 -
Dod09g0687 813 Gene3D Endonuclease Chain A 451 710 - -
Dod09g0687 813 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 327 366 IPR001736 GO:0003824
Dod09g0687 813 PANTHER PHOSPHOLIPASE D 8 813 - -
Dod09g0687 813 Pfam C2 domain 16 127 IPR000008 -
Dod09g0687 813 Pfam Phospholipase D C terminal 734 804 IPR024632 -
Dod09g0687 813 PANTHER PHOSPHOLIPASE D 8 813 IPR015679 -
Dod09g0687 813 PIRSF PLD_plant 2 813 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Dod09g0687 813 Gene3D Endonuclease Chain A 200 445 - -
Dod09g0687 813 SUPERFAMILY Phospholipase D/nuclease 504 743 - -
Dod09g0687 813 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 10 151 IPR035892 -
Dod09g0687 813 ProSiteProfiles C2 domain profile. 1 126 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0687 Dod-Chr9 13883501 13892391 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0687 9 813 Phospholipase D Gene Family (Wang group) AT3G15730 64.074 0.0 1106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0687 K01115 - qsu:111988169 1158.67