Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0670 ATGGCATCCTCAAATTCACCATGCGCAGCATGCAAGTTTCTGCGCCGCAAATGCCAACCAGAGTGTGCTTTTGCACCATACTTCCCACCTGATCAGCCCCAAAAGTTTGCAAACGTTCACAGAATCTTCGGGGCAAGCAATGTCACAAAGCTTCTCAACGACTTGCACCCTCACCAGCGTGAAGATGCTGTAAATTCCCTTGCCTATGAAGCAGAGATGAGGCTCCGTGACCCCGTCTATGGCTGCGTAGGAGTCATCTCTCTCCTTCAGCACCAACTTCGCCAGCTCCAAATGGACCTCTACTGTGCCAAATCAGAGCTCTCTAGGTACCAAAACCTGAGCATCACAACTAACCATGGCCTTATTAGTGCTGAATCTGCTACCACGGCCTACCACCACCACCACGCGCAGAACACGGGCAGCAGTGGTGGCCGTGACAACCATTATCACCACTACCACCATCACCACCAGTTCTTTCCAAGGGACCAGTACCAGCAGCAGGTGGTCAGAAGCTTTGAGGCAGGGAACAACTATGATGCTAGTCTGTTGGCCATGAACATCTCTGCTAGCTTAGGGCAGCTCAATCAGCTCCAACAGCACAGTGCTGCCGGTGGGGGCGACGACCGCCGTACCGTCAACCCCTCCTAG 648 0.534 MASSNSPCAACKFLRRKCQPECAFAPYFPPDQPQKFANVHRIFGASNVTKLLNDLHPHQREDAVNSLAYEAEMRLRDPVYGCVGVISLLQHQLRQLQMDLYCAKSELSRYQNLSITTNHGLISAESATTAYHHHHAQNTGSSGGRDNHYHHYHHHHQFFPRDQYQQQVVRSFEAGNNYDASLLAMNISASLGQLNQLQQHSAAGGGDDRRTVNPS* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0670 215 MobiDBLite consensus disorder prediction 131 145 - -
Dod09g0670 215 PANTHER LOB DOMAIN-CONTAINING PROTEIN 6-LIKE 3 178 - -
Dod09g0670 215 MobiDBLite consensus disorder prediction 131 150 - -
Dod09g0670 215 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 3 178 - -
Dod09g0670 215 ProSiteProfiles LOB domain profile. 6 107 IPR004883 -
Dod09g0670 215 Pfam Lateral organ boundaries (LOB) domain 7 103 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0670 Dod-Chr9 13050120 13050767 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0670 2 215 AS2 family AT1G65620 64.019 4.55e-83 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Dod09g0670 LOB 3e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0670 - - gmx:100819502 376.326