Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0661 ATGAGGAAGAAACTTGATACCCGTTTTCCTGCAGCAAGGATAAAGAAGATAATGCAAGCAGACGAGGATGTTGGAAAGATAGCACTTGCAGTTCCTGTTTTAGTTTCTAAAGCTCTAGAGCTGTTTTTGCAAGATCTGTGTGACCGTACTTATGAAATAACTCTTCAGAGAGGAGCAAAGACCATGAATTCATTGCATTTAAAACATTGTGTACAAAGCTATAATGTCTTCGACTTTCTGAGGGACGTCGTGAGTAGGGTTCCGGACTACAGCCATGGCCATAGCCATACAGAGGCTGGCTCTGATGATCGAGCAATTTCAAAAAGAAGGAAATCTACTGGTGATGATTATAATGACAGTGATGAAGAGGCTAAGAGGAGCAAGATGTATGAATTGGGCCACACTGGCAGTACTGGTAGAGGAAGAGGCCGAGGTAGAGGAAGAGGCCGTGGTCGAGGTGCTCGAACTGTAGAAAGAGAACCATCCCGTCAGGAAACCGAAACGGAGCCTCGCACTTCAATTCAGCTGGGCAACCATCATAACAGTAATACAACAACAAATGTGGCAATATTTAATGCTTCAGAGTCAAAGGAGTCATCAAAGGAGGATATTGCAGTCCCTGTCGAAAGCTCTGAATCGCTTCATAACATTGATCTGAATGCCAACACGAACCAAAATGAGGTCAAAGATGCCAGCGCAGCGGTTGATGCGTCATTGTCTGAGCCTGCAACAGAGAGCAAGCATGAAGAACTTCCGGGCTGGTCCCTTTCTGACGTGGACAAGATGGCCATTGACTCTATGCATCTTGCGCAACTCGGTGGGCGATTAGAAGAGGAGGAAGAAGATTATGATGAGGAGGGGTGA 864 0.4572 MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNSLHLKHCVQSYNVFDFLRDVVSRVPDYSHGHSHTEAGSDDRAISKRRKSTGDDYNDSDEEAKRSKMYELGHTGSTGRGRGRGRGRGRGRGARTVEREPSRQETETEPRTSIQLGNHHNSNTTTNVAIFNASESKESSKEDIAVPVESSESLHNIDLNANTNQNEVKDASAAVDASLSEPATESKHEELPGWSLSDVDKMAIDSMHLAQLGGRLEEEEEDYDEEG* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0661 287 MobiDBLite consensus disorder prediction 168 185 - -
Dod09g0661 287 Gene3D Histone, subunit A 1 86 IPR009072 GO:0046982
Dod09g0661 287 MobiDBLite consensus disorder prediction 90 185 - -
Dod09g0661 287 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 8 71 IPR003958 -
Dod09g0661 287 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 1 286 - -
Dod09g0661 287 SUPERFAMILY Histone-fold 4 98 IPR009072 GO:0046982
Dod09g0661 287 MobiDBLite consensus disorder prediction 151 167 - -
Dod09g0661 287 MobiDBLite consensus disorder prediction 235 254 - -
Dod09g0661 287 MobiDBLite consensus disorder prediction 90 130 - -
Dod09g0661 287 PANTHER HISTONE SUPERFAMILY PROTEIN 1 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0661 Dod-Chr9 12483387 12489322 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0661 1 276 CCAAT-HAP5 Transcription Factor Family AT3G12480 52.797 1.36e-79 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Dod09g0661 CBFD_NFYB_HMF 2.1e-19 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0661 K21752 - gmx:100814712 402.905