Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0617 ATGGCTGACTCCGCGTCAACCCTGTCTACTTCTAACAATGACAGCACTGTTGCTGATTCATCTTGTTTCCGACGCACGGTCTGCTTGTACGATTGGTGGCTGATTAAAGCTGAAAGTGACTTCGAAGGAAAGTGGTTGGCCGTCTCAGGCATTACATCAGAAAAGGAAAAAGCAATTCGAGTGTTTGTCTCTGCTCCTGTTACCAAAAGATACGATATGCTCTCTCTGGAGACTGCAGATGGGATATACATTATGATCAGAGGTTTCATCAACGAGCAGCGCACACTTGAAAATGGTTTCACTGCTGAGGTTTTCAATAATTTCATATTTGGCTTTCCTCCAAACTGGGAAAGCTTTGTCGTAGATTGGTTCAGGCATGAAGCAAGTACTGGCATTGATTTGGGTAGTGCTGTTCCTGAGAAAGTATCACCAATTGATTCAGAGGTCATATCTGATGTGGCCTTGGGAGCTCACAGGAAGCCACTACCCATAGAGGAATGCCATGCGTCTAAGGAGATGATGGGTGGGGTTAATGTTGTTCTTGGTAGTGGCAGCAATAGGCGTAGTGCGAGGCTGCATAACATCAAGGTCTGTCAGCAGAAGATTCCTGCTTCTGAAGTTGCTCAGAAGCATCCAGGTAAAAAGCAGCACTATTCCTCTAGGGCCTTGGAGAATCCTGATGGAGAGGGATTGGAATGTCTAACGGCACCTATTCAATCACAATCACCAAGACAAGTAAACACACCATCTAACAAGCTCATTAAAAACTCATCAGCAATTGATCCAGAGGTCTTATCTGATGAGGAATGCCATGCGTCTAAGGAGACAACCGGTGGGCATAATGTTGCTCTTGGTAGTGGCAGCAACAGACGTAGTATGAGGCTGCATAATGTCAAAGTCTGTCAGCAGAAGAAGCCTGCTTCTGAAGTTGCTCACAAGCATCCGGGTAAAGAGCAACACCCTCCTTCCTCTGAGGCCTTGGAGAATCCTGATGGAGAGGGACTGGAAAATCTCATGGCACCTGTTCAATCACAATCACCGAGACAAGTAAATACACCATCTAACAAGCTCATTAAAATCTCTACATCAGCAATTGATCAAAAGGTCTTATTAGATGAAGAGGCCTTGGGAGCTCACGAGAGGGAATTCCCCCCAGAGGAATGCCATGTGTCTAAGGAGACAACCGGTGGGGATAATGTTGCTCTTGGTAGTGGCAGCAACAGACGTAGTATGAGGCTGCATAATATCAAAGTCTGTCAGCAGAAGAAGCTTGCTTCTGAAGTTGCTCATAAGCATCCAGGTAAAGAGCAACACTCTTCCTCTGGGGCCTTGGAGAATCCTGATGGAGAGGGACTGGAAAGTCTCATGGTACCTGTTCTTTCACAATCACCAAGAGAAGTAAATACACCTTCTAGCAAGCTCATTAAAAACTCTTCATCAGCAATTGATCCAAAGGTCTTATTTGATGGCGAAGCACAATCTATTCCAACTTCTTCGAAATCCCCAAAACAGGCCATGGGAGCTAATGAGAAGCCATTCCCAACACACGAATGCCATGTGTCTAAGGAGACAACGGGTGGGGTTAATGTTGCCCTTGGTAGTGGCAGCAAAAGACGTAGTAAACGGTTGCATAACATCAAAGTCTCTCAGCCGAAGATGCCTGCCTCTGAAGTTGCTCGGAAGCATCCAGGTGAAGAGCAGCACTCTTCCTCTGGGTCCTTGGAGATTCTTGATGGAGAGGGACTGAAAAGTTCCATGACACCCGTTCAATCACAATCACCAGCACAAGTGAATACACAATCTAGGAAGCTCCTTAAAAACTCTGCATCAAGAGTGTCTAGATCTTTCTCTGCAAAGGATGAAGGCTCTTCTAAGAAACAGAAAGTGACAGTTGAAACAAAAGTGATCACACCTAAAAGAAAAAGGGCTAGATCTGCTTGTGCTGTTAAATATACACAAGAAAGGGACATAGATCCCTTGATCAAGGGAGGCAAAGAGAAAATATCCTCAGTTTCTCCACTGTCATTGAGCTTCAGAAAATCCAGATCTGGAAGGTTGCTTCTACCGCCCTTAGAGTTTTGGCGTAATCAGATAGCAATTTACAATGCGGTTTAG 2115 0.4515 MADSASTLSTSNNDSTVADSSCFRRTVCLYDWWLIKAESDFEGKWLAVSGITSEKEKAIRVFVSAPVTKRYDMLSLETADGIYIMIRGFINEQRTLENGFTAEVFNNFIFGFPPNWESFVVDWFRHEASTGIDLGSAVPEKVSPIDSEVISDVALGAHRKPLPIEECHASKEMMGGVNVVLGSGSNRRSARLHNIKVCQQKIPASEVAQKHPGKKQHYSSRALENPDGEGLECLTAPIQSQSPRQVNTPSNKLIKNSSAIDPEVLSDEECHASKETTGGHNVALGSGSNRRSMRLHNVKVCQQKKPASEVAHKHPGKEQHPPSSEALENPDGEGLENLMAPVQSQSPRQVNTPSNKLIKISTSAIDQKVLLDEEALGAHEREFPPEECHVSKETTGGDNVALGSGSNRRSMRLHNIKVCQQKKLASEVAHKHPGKEQHSSSGALENPDGEGLESLMVPVLSQSPREVNTPSSKLIKNSSSAIDPKVLFDGEAQSIPTSSKSPKQAMGANEKPFPTHECHVSKETTGGVNVALGSGSKRRSKRLHNIKVSQPKMPASEVARKHPGEEQHSSSGSLEILDGEGLKSSMTPVQSQSPAQVNTQSRKLLKNSASRVSRSFSAKDEGSSKKQKVTVETKVITPKRKRARSACAVKYTQERDIDPLIKGGKEKISSVSPLSLSFRKSRSGRLLLPPLEFWRNQIAIYNAV* 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0617 704 MobiDBLite consensus disorder prediction 279 296 - -
Dod09g0617 704 MobiDBLite consensus disorder prediction 461 479 - -
Dod09g0617 704 MobiDBLite consensus disorder prediction 235 257 - -
Dod09g0617 704 PANTHER KINETOCHORE-ASSOCIATED PROTEIN KNL-2 HOMOLOG 4 702 - -
Dod09g0617 704 MobiDBLite consensus disorder prediction 203 259 - -
Dod09g0617 704 MobiDBLite consensus disorder prediction 584 617 - -
Dod09g0617 704 MobiDBLite consensus disorder prediction 208 222 - -
Dod09g0617 704 MobiDBLite consensus disorder prediction 273 337 - -
Dod09g0617 704 Pfam SANTA (SANT Associated) 27 118 IPR015216 -
Dod09g0617 704 MobiDBLite consensus disorder prediction 426 631 - -
Dod09g0617 704 MobiDBLite consensus disorder prediction 387 408 - -
Dod09g0617 704 PANTHER KINETOCHORE-ASSOCIATED PROTEIN KNL-2 HOMOLOG 4 702 - -
Dod09g0617 704 MobiDBLite consensus disorder prediction 306 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0617 Dod-Chr9 10639362 10654060 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Dod09g0617 SANTA 1.7e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0617 - - lja:Lj0g3v0006579.1 464.536