Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0606 ATGGCTCAGAAGACAGAGAAAGAAGAGACGGAGTTCAAGGTTCCCGAAACCATCACCCCCTGCGTCAACAACTGCGGCCTCACCGGTAATCCCGCAACAAACAACATGTGCCAGAACTGCTTCAAGGCCACAACCACCACCACAACAACCACAACGACAGCAGCAGCAACAACAACAACAACAACCACCACCACAACAGGAATCTCACAACAACCTTCTAGATTCTCCGAAGAGAAAGCCTCCTCCGCGACCGTCAGATCTGCCACGTCATCGCGCTCCCCGAAGAGATCTCACCCGTCCGACGAGGAGGAACAACAGCTAGATCCCGCGACGGGAACGGATCGGGGCGAAACGACGTCGTCGGAGGCGAAGCGCGTCGTGAACCGCTGCTCCGGCTGCCGGAGAAGGGTGGGACTGACCGGTTTCCGGTGCCGGTGCGGCGAGCTCTTCTGCGCGGAGCACCGGTACTCTGATCGTCACGAGTGCACCTACGACTACAAGGCCGCGGGGAGGGAAGCCATCGCGAGAGAGAATCCGGTGGTCAAAGCCGCGAAGATCGTCAAGGTCTGA 570 0.5877 MAQKTEKEETEFKVPETITPCVNNCGLTGNPATNNMCQNCFKATTTTTTTTTTAAATTTTTTTTTTGISQQPSRFSEEKASSATVRSATSSRSPKRSHPSDEEEQQLDPATGTDRGETTSSEAKRVVNRCSGCRRRVGLTGFRCRCGELFCAEHRYSDRHECTYDYKAAGREAIARENPVVKAAKIVKV* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0606 189 ProSiteProfiles Zinc finger A20-type profile. 15 49 IPR002653 GO:0003677|GO:0008270
Dod09g0606 189 MobiDBLite consensus disorder prediction 60 121 - -
Dod09g0606 189 SMART A20_3 18 42 IPR002653 GO:0003677|GO:0008270
Dod09g0606 189 MobiDBLite consensus disorder prediction 60 94 - -
Dod09g0606 189 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 5 1 189 - -
Dod09g0606 189 SUPERFAMILY AN1-like Zinc finger 115 183 IPR035896 -
Dod09g0606 189 ProSiteProfiles Zinc finger AN1-type profile. 124 170 IPR000058 GO:0008270
Dod09g0606 189 Gene3D - 76 185 IPR035896 -
Dod09g0606 189 SMART AN1_Zf_4 130 167 IPR000058 GO:0008270
Dod09g0606 189 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 189 - -
Dod09g0606 189 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 21 60 - -
Dod09g0606 189 Pfam AN1-like Zinc finger 130 167 IPR000058 GO:0008270
Dod09g0606 189 Pfam A20-like zinc finger 20 42 IPR002653 GO:0003677|GO:0008270
Dod09g0606 189 MobiDBLite consensus disorder prediction 95 110 - -
Dod09g0606 189 Gene3D - 1 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0606 Dod-Chr9 10100804 10103069 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0606 8 189 C2H2 Transcription Factor Family AT3G52800 36.559 1.76e-35 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0606 - - adu:107463072 302.367