Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0603 ATGGACAAGGGACCACCGCCTAGCCTCTTTGTTAATGATGGTTCGTTCATGGAGAAGTTCAAGCAACTCCAACAGGAGCAGGAGAAGGAGAAGAATGCCAAATTAGAGGAGTCTAAACCAATTAAAGTTGTTTCAGGGTCTTTAACTCCTACTCTCTCCATTAACAAGGCTAATGATACACGGAAAACAAAAGCTTCCCCGGCTGGTTCGAGTGGCAAACTTGCTTTCAGTCTTAAACAAAAGTCAAAGTTAGTTTCACCCCCTGTTAAGTTAGCTGATGACGATGAAGAAGAAACAGAGGCAGGGGATTTTTCAAATGATGCACTGCCAAAACGGCAAAAGTTGAGTCAGGAGGATGGCACTGAGCAATCATCGAGACAACTTGATGTTGCACCTCCTTCACCAAGTGATCCAACAGTGAAGAAAGTTGCTGACAAACTAGCAAGCTTTGTGGCTAAAAATGGAAGACAATTTGAGGATGTTACACGCCAAAAGAATCCGGGGGATACACCTTTCAAATTTTTATTTGATCCGAAATGTGCTGAGTACAAATATTATGAATATCAACTTGCTCAAGAGGAAAAGGCCCTCGCGCAGTCTTGGGAACCACAGGCAAATCGTGATGGGGGTACTAGCATTTCATCTTCCAGACAAACACATGCCCCTCAGAGATCATCTCAGCAGCAATCAACCTACCAAATCCCTGCTTCTGCTTTATATGAAAGTGCTGAAGTACCAAGGGCTTCTGGATCTTCAGTTCAAGCATTTTCAGTCAGAAGCACGGATGAGTCCAGTGGATCTTCAAATGCCGATTCTTTAGCACTAATGGAATTCTACATGAAGAAAGCTGCTCAGGAAGAGAGGTTGAGACAACCTAAGCATTCAAAGGATGAGATGCCCCCTCCTGCTTCTCTTCAAGCTTCTGGGAAAAAAGGCCATCACATGGGTGATTACATTCCCCAAGAAGAACTTGAGAAGTTCTTGGCTACCTGCAATGATGCGGCCGCACAGAAAGCTATAAAAGAGGCTGCAGAGAAGGCCAAAATCCAGGCTGATAATGTGGGCCACAAGCTTTTATCAAAAATGGGTTGGAGAGAAGGTGAGGGTTTAGGCAGCTCCAGGAAGGGTATTTCTGATCCTATAATGGCAGGCGATGTTAAGAAAGATAACTTGGGGGTCGGTGCTGTCCAGCCTGGGGAGGTTACTGCTGATGATGACATTTATGAGCAGTATAAAAAGCGGATGATGCTTGGTTACCGTCACAGACCCAACCCTCTGGTAAACACCAACCGTTTTGGACTGTTAATGTCTCGAGTTGTTGTAGCCTGTTTTCATGTCTTGGTTTTGTTTACTTTTGCAGAACAATCCTCGTAA 1374 0.4447 MDKGPPPSLFVNDGSFMEKFKQLQQEQEKEKNAKLEESKPIKVVSGSLTPTLSINKANDTRKTKASPAGSSGKLAFSLKQKSKLVSPPVKLADDDEEETEAGDFSNDALPKRQKLSQEDGTEQSSRQLDVAPPSPSDPTVKKVADKLASFVAKNGRQFEDVTRQKNPGDTPFKFLFDPKCAEYKYYEYQLAQEEKALAQSWEPQANRDGGTSISSSRQTHAPQRSSQQQSTYQIPASALYESAEVPRASGSSVQAFSVRSTDESSGSSNADSLALMEFYMKKAAQEERLRQPKHSKDEMPPPASLQASGKKGHHMGDYIPQEELEKFLATCNDAAAQKAIKEAAEKAKIQADNVGHKLLSKMGWREGEGLGSSRKGISDPIMAGDVKKDNLGVGAVQPGEVTADDDIYEQYKKRMMLGYRHRPNPLVNTNRFGLLMSRVVVACFHVLVLFTFAEQSS* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0603 457 Coils Coil 17 37 - -
Dod09g0603 457 Pfam G-patch domain 352 395 IPR000467 GO:0003676
Dod09g0603 457 MobiDBLite consensus disorder prediction 286 315 - -
Dod09g0603 457 MobiDBLite consensus disorder prediction 199 238 - -
Dod09g0603 457 SMART G-patch_5 349 396 IPR000467 GO:0003676
Dod09g0603 457 ProSiteProfiles G-patch domain profile. 351 398 IPR000467 GO:0003676
Dod09g0603 457 PANTHER ARGININE/SERINE RICH SPLICING FACTOR SF4/14 3 431 IPR040169 -
Dod09g0603 457 PANTHER SURP AND G PATCH DOMAIN-CONTAINING 1 3 431 - -
Dod09g0603 457 Pfam Surp module 142 191 IPR000061 GO:0003723|GO:0006396
Dod09g0603 457 MobiDBLite consensus disorder prediction 104 119 - -
Dod09g0603 457 Gene3D Surp module 115 199 IPR035967 GO:0003723|GO:0006396
Dod09g0603 457 MobiDBLite consensus disorder prediction 23 38 - -
Dod09g0603 457 MobiDBLite consensus disorder prediction 44 67 - -
Dod09g0603 457 SMART surpneu2 141 195 IPR000061 GO:0003723|GO:0006396
Dod09g0603 457 MobiDBLite consensus disorder prediction 23 141 - -
Dod09g0603 457 ProSiteProfiles SURP motif repeat profile. 143 186 IPR000061 GO:0003723|GO:0006396
Dod09g0603 457 SUPERFAMILY Surp module (SWAP domain) 124 194 IPR035967 GO:0003723|GO:0006396
Dod09g0603 457 MobiDBLite consensus disorder prediction 204 237 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0603 340 407 C2H2 Transcription Factor Family AT5G26610 39.130 2.30e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0603 K13096 - gmx:100786213 624.78