Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0580 ATGGACTACGAACCCTTCGACAGTAGCGGAACTGATGATGATCTTCCACCTACACATCAAAATAGGATTGGCAGGGGAGGACGCCTTGCTGGGAACAGAAGATCTGCTGTGGGTTCAATTCCATACCCCAGGATGTTTGGTGAAGTTGATATGGAAACACAAATTCACCAACTTGAGCAGGAAGCGTACAGTTCAGTTCTACGAGCCTTTAAAGCTCAAGCTGATGCCATTACTTGGGAGAAAGAAAGTTTGATTACAGAATTGAGAAAAGAACTGAGATTATCAAATGAGGAACACAGAGAACTTCTAAGTCGGGTTAATGCGGATGATGTCATACGGAGGATAAGGGAGTGGAGACAGGCAGGTGGCCATCAGCCAGGCATCGTGAGCACTGGTCCAGCACTACATGATTCTAATCCCAGCCCAACAGTCTCTGCACCTCACAAAAAGCCAAAAATTACCCCATCTGCACCATCACGATCTTTTGGTGGGCCTTCTCCTTCATTTCATCCCCAGACACTGACTGCACCCCATCAACCAACTTCTACTACCAAACGAGGATCTGGTCATGGACCAAAGGGAAAGAAGCACAAACCTGGTCAAATATTACCTGGTGTGTCTTCAATGAAGCAGTATCCTTCATCTGGACATGGTGGAAGGAATCAAGTACCTAATAGAGCTGGTGTGGGTGACCTAGCTGAGGGAACATCATTTGATTCATTGATTGGTAGGAGAGTACGGACGAAATGGCCTGATGACAATAACTTTTATGAAGCTGTTATTGCAGACTACAATCCAGCTAATGGCCTACATAATCTGGTCTATGACATGGGGACTGCAGATGAAACATGGGAATGGGTTAATCTGTCAGAGATATCTCCTGAAGATATTCAATGGGTTGGTGAGGACCCTGGAATCAATCTTCGTGGGAGTCTGGCTGGTTCTGGGCATGGGATGAATAGGCCTGTTGGACGTAAAGGTATAGGTCGTATGGGATCTTCAAAGAATGGCATACGAAAGAAAGCTCCAGATGATATACAAATACTTCACACAGACACGCTAATCAAGGAGGTGGAGGGGGTATTCAGTGCAAATCATCCTGATCCTGGTGAAATTGAGAAAGCCAAGAAAGTATTGAAGGATCATGAGCAAGCTCTTATTGATGCCATTGCTGGACTTGACGATCTTTCTGATGGTGAAAGTGATGGGGGCGGTCACCATTTCTCACATGCTCAATCAATGGATCGAGAATAA 1254 0.4537 MDYEPFDSSGTDDDLPPTHQNRIGRGGRLAGNRRSAVGSIPYPRMFGEVDMETQIHQLEQEAYSSVLRAFKAQADAITWEKESLITELRKELRLSNEEHRELLSRVNADDVIRRIREWRQAGGHQPGIVSTGPALHDSNPSPTVSAPHKKPKITPSAPSRSFGGPSPSFHPQTLTAPHQPTSTTKRGSGHGPKGKKHKPGQILPGVSSMKQYPSSGHGGRNQVPNRAGVGDLAEGTSFDSLIGRRVRTKWPDDNNFYEAVIADYNPANGLHNLVYDMGTADETWEWVNLSEISPEDIQWVGEDPGINLRGSLAGSGHGMNRPVGRKGIGRMGSSKNGIRKKAPDDIQILHTDTLIKEVEGVFSANHPDPGEIEKAKKVLKDHEQALIDAIAGLDDLSDGESDGGGHHFSHAQSMDRE* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0580 417 MobiDBLite consensus disorder prediction 1 35 - -
Dod09g0580 417 Gene3D - 238 295 - -
Dod09g0580 417 SUPERFAMILY ENT-like 47 148 IPR036142 -
Dod09g0580 417 MobiDBLite consensus disorder prediction 397 417 - -
Dod09g0580 417 Gene3D ENT domain 46 146 IPR036142 -
Dod09g0580 417 Pfam ENT domain 53 121 IPR005491 -
Dod09g0580 417 SUPERFAMILY Tudor/PWWP/MBT 240 280 - -
Dod09g0580 417 MobiDBLite consensus disorder prediction 207 221 - -
Dod09g0580 417 MobiDBLite consensus disorder prediction 399 417 - -
Dod09g0580 417 MobiDBLite consensus disorder prediction 311 339 - -
Dod09g0580 417 PANTHER PROTEIN EMSY-LIKE 4 1 417 IPR033485 GO:0050832
Dod09g0580 417 SMART ENT_2 51 124 IPR005491 -
Dod09g0580 417 Coils Coil 85 109 - -
Dod09g0580 417 MobiDBLite consensus disorder prediction 159 188 - -
Dod09g0580 417 PANTHER PROTEIN EMSY-LIKE 3-LIKE ISOFORM X2 1 417 - -
Dod09g0580 417 MobiDBLite consensus disorder prediction 122 227 - -
Dod09g0580 417 ProSiteProfiles EMSY N-terminal (ENT) domain profile. 51 138 IPR005491 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0580 Dod-Chr9 9394066 9401405 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0580 - - gmx:100791651 674.47