Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0577 ATGCGAGGCCTCACCGGACGCGAGCCCCCAGTCTACCATCCTGGCCTTGCTATTTTTCATGATTGGGTCAAAAGGTGGAAGTGCTGTGACATTCACAAGGAACACAAATTCTACCTCCTTGGTAAATTATCATCTGAGGTTGGATGGAACTATTATGATACCATCAAGGAACTTGAAAAGAAGACAAAGGAAAAAGCACATTTGGCTTATGAGAGAAAGAAAGAGCTCGCCAAATTAGGGGTGAAAGCTGAGAAAGTTGCCAATGATAAGCTTAGTCCCCAACTTGATATTTTGCTCCTATTAAGCACTGAGTAG 315 0.4317 MRGLTGREPPVYHPGLAIFHDWVKRWKCCDIHKEHKFYLLGKLSSEVGWNYYDTIKELEKKTKEKAHLAYERKKELAKLGVKAEKVANDKLSPQLDILLLLSTE* 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0577 104 Gene3D - 5 40 - -
Dod09g0577 104 PANTHER 60S RIBOSOMAL PROTEIN L13A-4 27 98 - -
Dod09g0577 104 Pfam CHORD 11 32 IPR007051 -
Dod09g0577 104 PANTHER RIBOSOMAL PROTEIN L13 27 98 IPR005822 GO:0003735|GO:0005840|GO:0006412
Dod09g0577 104 Gene3D - 53 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0577 Dod-Chr9 9337762 9341094 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0577 15 98 Cytoplasmic Ribosomal Protein Gene Family AT5G48760 58.889 1.91e-27 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0577 K02872 - cit:102617059 86.2705