Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0564 ATGCAAAAAATGGAAAGAGATTTTGATAGAAGATACATAAAGAAGGGGCCATGGAGTGGTGAAGAAGATGAGGTGCTACTGAAGCATGTCAGCAAGTATGGTCCAAGGGACTGGAGCTCCATTCGATCCAAAGGCTTGTTGCCTCGAACTGGAAAATCTTGTCGCCTTAGATGGGTTAACAAACTTAGACCCAACTTGAAGAATGGCTGCAAGTTTACTGCAGAAGAGGAGAGGGTGGTGATAGAATTGCAGGCAGCAATTTGGGAACAAATGGGCCAAAATTGCTACATATTTGGAAGGGAGAACCGACAACGATGTGAAGAACTTCTGGAGCAGCAGGAGAAAGAAGTTGGAGAGGATGTTGCAGAGGGCGTCGCCATCAAAGCCACAGAAAAACAGAGGAAAAGCTCCTCTTAA 417 0.4532 MQKMERDFDRRYIKKGPWSGEEDEVLLKHVSKYGPRDWSSIRSKGLLPRTGKSCRLRWVNKLRPNLKNGCKFTAEEERVVIELQAAIWEQMGQNCYIFGRENRQRCEELLEQQEKEVGEDVAEGVAIKATEKQRKSSS* 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0564 138 SMART sant 14 64 IPR001005 -
Dod09g0564 138 SUPERFAMILY Homeodomain-like 13 90 IPR009057 -
Dod09g0564 138 ProSiteProfiles Myb-like domain profile. 10 62 IPR001005 -
Dod09g0564 138 Pfam Myb-like DNA-binding domain 18 77 - -
Dod09g0564 138 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 66 IPR017930 -
Dod09g0564 138 Gene3D - 7 68 - -
Dod09g0564 138 CDD SANT 17 62 IPR001005 -
Dod09g0564 138 PANTHER TRANSCRIPTION FACTOR DUO1 8 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0564 Dod-Chr9 9035656 9036568 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0564 1 102 MYB Transcription Factor Family AT3G60460 66.667 4.66e-42 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Dod09g0564 Myb_DNA-bind_6 7.9e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0564 K09422 - gmx:100793689 147.132