Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dod09g0552 | ATGAATGTTCGAGGGAGTTTATATTACTGTTATGTGAAAGAGGAAGAATTGGCTGAGGTGGTTCAATCACTATGGAAGGCTGCAACTGTATTGAGCCGCAATGGCCAGGCTGATGAATTATTGATGAAATACCAATATATCTCTGATTTCTTTATTGCCCTTGCTTATTTCTCTATCCCTCTGGAGCTTATCTACTTTGTTAAGAAATCAGCAGTATTTCCATATAGATGGGTCCTTGTTCAGTTTGGTGCTTTCATAGTACTATGTGGAGCAACACATCTAATTAATTTATGGACCTTCACAGTGCATACAAAAACTGTGGCCATAGTAATGACCACTGCTAAGGTTTTAACTGCTGTGGTTTCATGTGCAACTGCCCTTATGCTTGTACATATTATTCCTGATTTACTAAGTGTTAAAACTAGAGAACTATTCTTGAAGAACAAGGCTGCCGAACTTGATAGAGAAATGGGCCTGATTCGCACACAGGAAGAAACTGGTCGACATGTTAGGATGCTGACTCATGAGATTAGAAGCACTTTGGATAGACACACGATACTGAAAACAACTCTTGTTGAACTGGGTAGAACTTTGGCACTTGAGGAGTGTGCCTTGTGGATGCCTACACACACTGGGTTGGAACTTCAACTCTCCTACACATTGCGACAACAAAACCCAGTTGGATACACAGTGCCCATTCATCTTCCTGTGATCAATCAAGTATTTAGTAGTAACCGTGCAGTAAAAATTTCACCGAATTGCCCAGTTGCTAGATTGCGACCTCATACAGGAAACTACATGCCCGGGGAGGTAGTTGCCGTTCGGGTCCCTCTTCTACATCTATCTAACTTCCAAATATATGATTGGCCCGAGGTTTCAACGAGAAGCTATGCCTTGATGGTGTTGATGCTTCCATCAGATAGTGCTAGACAATGGCATGTACACGAGTTAGAGTTGGTTGAGGTAGTTGCTGATCAGGTAGCTGTTGCTCTTTCACATGCTGCAATCTTGGAAGAGTCAATGAGGGCAAGGGATATGCTTATGGAGCAGAATGTTGCACTTGATCTGGCAAGAAGGGAAGCAGAAACTGCAATACGTGCTCGCAATGACTTTTTGGCTGTTATGAATCACGAGATGAGAACTCCCATGCATGCAATTATTGCACTGTCTTCATTGTTACAGGAAACAGAGTTGACAGCTGAGCAACGTCTGATGGTAGAGACAATATTGAAAAGCAGCAATTTGTTGGCTACACTCATCAATGATGTTTTGGATCTTTCACGGCTTGAAGATGGCAGTCTTCAACTTGAAGCAACAACATTTAGCCTTCATTCTGTTTTCAGAGAGGTCCTGAACCTGATTAGGCCTGTTGCATCTGTGAAAAAGTTGTCACTCACTTTACATTTAGCTCCAGATTTGCCAGTGTATGCCATTGGTGATGAAAAACGTCTCATGCAAACTTTTCTGAATGTTGTTGGTAATGCGGTGAAGTTCTCAAAAGCGGGCAGCATTTCCATCACAGTTTTTGTTGCAAATCCTGAATCCTTCAAGGATGATGCTAGAATTCCCGACTTCCATCCAGTGCCAAGTGATGGTCACTTTTATTTGCGAGTACAGGTAAAAGATATGGGATCTGGAATCAGTCCACAAGATATTCCAAACTTATTCACTAAGTTTGCACAAAGCCAGTCACTAACAACAAGAGGTCCTGCTGGAAGTGGACTTGGCCTTGCCATTTGTAGGAGGTTTGTAAATCTCATGGAAGGTCATATTTGGATTGAAAGTGAAGGTATTGGTAAAGGATGTACAGTCACTTTCATTGTGAAACTTGGAATCCCTGACCGATCAAATGAACCTAAACTGCCTTATGTACCTAAAGTTCTGGGAAATCATGGATCTACAAACTTTGCAGGTCTCAAGGTTCTTGTGATGGATGATAATGGGGTTAGCAGGACAGCAACAAAGAAAATTCTTATTCATTTAGGATGTGACGTCACAACTGTAAGCTCCAGTGAAGAGTGTTTGCGTGTCGTTTCCGCAGAACACAGAGTGGTGTTCATGGATGTGTGTACAGGATTAGACGGTTATGAACTAGCGATACGGATACATGAGAAGTTTATGAAACGTCCAGATAGGCCCCTAATAGTTGCTCTTACTGGAAACACCAACAAGGTGACTAGAGAGAACTGTATGAGGGTTGGTATGGATGGCCTTATACTGAAACCTGTTCCTATTGACAAAATGAGGGGTGTTTTATCTGAACTCCTGGAGCACCGGGTTCTATTTGAAACAATGTAA | 2298 | 0.4199 | MNVRGSLYYCYVKEEELAEVVQSLWKAATVLSRNGQADELLMKYQYISDFFIALAYFSIPLELIYFVKKSAVFPYRWVLVQFGAFIVLCGATHLINLWTFTVHTKTVAIVMTTAKVLTAVVSCATALMLVHIIPDLLSVKTRELFLKNKAAELDREMGLIRTQEETGRHVRMLTHEIRSTLDRHTILKTTLVELGRTLALEECALWMPTHTGLELQLSYTLRQQNPVGYTVPIHLPVINQVFSSNRAVKISPNCPVARLRPHTGNYMPGEVVAVRVPLLHLSNFQIYDWPEVSTRSYALMVLMLPSDSARQWHVHELELVEVVADQVAVALSHAAILEESMRARDMLMEQNVALDLARREAETAIRARNDFLAVMNHEMRTPMHAIIALSSLLQETELTAEQRLMVETILKSSNLLATLINDVLDLSRLEDGSLQLEATTFSLHSVFREVLNLIRPVASVKKLSLTLHLAPDLPVYAIGDEKRLMQTFLNVVGNAVKFSKAGSISITVFVANPESFKDDARIPDFHPVPSDGHFYLRVQVKDMGSGISPQDIPNLFTKFAQSQSLTTRGPAGSGLGLAICRRFVNLMEGHIWIESEGIGKGCTVTFIVKLGIPDRSNEPKLPYVPKVLGNHGSTNFAGLKVLVMDDNGVSRTATKKILIHLGCDVTTVSSSEECLRVVSAEHRVVFMDVCTGLDGYELAIRIHEKFMKRPDRPLIVALTGNTNKVTRENCMRVGMDGLILKPVPIDKMRGVLSELLEHRVLFETM* | 766 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dod09g0552 | 765 | Pfam | GAF domain | 182 | 331 | IPR003018 | GO:0005515 | |
Dod09g0552 | 765 | SMART | HisKA_10 | 367 | 432 | IPR003661 | GO:0000155|GO:0007165 | |
Dod09g0552 | 765 | Pfam | His Kinase A (phospho-acceptor) domain | 368 | 432 | IPR003661 | GO:0000155|GO:0007165 | |
Dod09g0552 | 765 | PANTHER | ETHYLENE RECEPTOR 1-LIKE | 30 | 762 | - | - | |
Dod09g0552 | 765 | SMART | gaf_1 | 182 | 341 | IPR003018 | GO:0005515 | |
Dod09g0552 | 765 | Gene3D | - | 432 | 617 | IPR036890 | - | |
Dod09g0552 | 765 | PANTHER | TWO-COMPONENT SENSOR HISTIDINE KINASE | 30 | 762 | - | - | |
Dod09g0552 | 765 | Gene3D | - | 333 | 431 | - | - | |
Dod09g0552 | 765 | SMART | HKATPase_4 | 479 | 612 | IPR003594 | - | |
Dod09g0552 | 765 | SUPERFAMILY | CheY-like | 635 | 757 | IPR011006 | - | |
Dod09g0552 | 765 | PRINTS | Bacterial sensor protein C-terminal signature | 571 | 589 | IPR004358 | GO:0016310|GO:0016772 | |
Dod09g0552 | 765 | PRINTS | Bacterial sensor protein C-terminal signature | 554 | 564 | IPR004358 | GO:0016310|GO:0016772 | |
Dod09g0552 | 765 | PRINTS | Bacterial sensor protein C-terminal signature | 536 | 550 | IPR004358 | GO:0016310|GO:0016772 | |
Dod09g0552 | 765 | Gene3D | - | 633 | 765 | - | - | |
Dod09g0552 | 765 | ProSiteProfiles | Response regulatory domain profile. | 640 | 756 | IPR001789 | GO:0000160 | |
Dod09g0552 | 765 | Pfam | Response regulator receiver domain | 641 | 749 | IPR001789 | GO:0000160 | |
Dod09g0552 | 765 | SUPERFAMILY | GAF domain-like | 185 | 334 | - | - | |
Dod09g0552 | 765 | Pfam | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 479 | 610 | IPR003594 | - | |
Dod09g0552 | 765 | SUPERFAMILY | Homodimeric domain of signal transducing histidine kinase | 353 | 433 | IPR036097 | GO:0000155|GO:0007165 | |
Dod09g0552 | 765 | PIRSF | Ethylen_sen_hybr_HK | 17 | 763 | IPR014525 | GO:0004672|GO:0005789|GO:0009723|GO:0038199|GO:0051740 | |
Dod09g0552 | 765 | Gene3D | - | 160 | 332 | IPR029016 | - | |
Dod09g0552 | 765 | ProSiteProfiles | Histidine kinase domain profile. | 374 | 612 | IPR005467 | - | |
Dod09g0552 | 765 | SUPERFAMILY | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 421 | 610 | IPR036890 | - | |
Dod09g0552 | 765 | CDD | HisKA | 365 | 428 | IPR003661 | GO:0000155|GO:0007165 | |
Dod09g0552 | 765 | SMART | REC_2 | 639 | 752 | IPR001789 | GO:0000160 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dod09g0552 | Dod-Chr9 | 8719310 | 8734054 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dod09g0552 | 37 | 765 | Miscellaneous Gene Families | AT1G66340 | 81.122 | 0.0 | 1208 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | Others | Dod09g0552 | GAF | 6.8e-15 | CL0161 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Dod09g0552 | K14509 | - | gmx:100795799 | 1296.95 |