Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0533 ATGGCTGGTGGTAGAAGGAATAGGCACCATTTCAGCAGGATCCATGCATTCACTTGTGGGAAAGCTTCATTCAAAGATGACCATTCACTTATAGGAGGCCCTGGCTTCTTAAGATTAGTGTACTGCAATGAATCAGAACGTGCTGAAGGGAGTTTTCAGTACTATGGTGACAATTATGTTAGGACAACAAAGTACACACTGGCTACTTTCCTCCCCAAGTCCTTGTTTGAGCAGTTCAGAAGGGTGGCCAATTTTTACTTCCTTGTCTGTGCAATCCTGTCTTTCTCGCCGGTTTCGCCTTACTCGGCTGTCAGCAATGTTGTCCCTCTTGTGGTTGTGGTCGCTGCTACAATGGGGAAAGAGGCTGTTGAGGATTGGAGGCGGAAAAAGCAGGATATTGAGATGAACAACAGAAGGGTTAAAGTACATCAAGGAGAAGGTGTTTTTGAACATTCTAAATGGAAGGATTTGAAAGTTGGAGATGTAGTGAAAGTGGAAAAAGATGAATTTTTCCCTGCAGATCTCATCTTACTTTCATCAAACTATGATGATGCGATTTGCTATGTTGAGACCATGAATCTTGATGGAGAAACTAATCTGAAACTGAAGCAAGCATTGGAAAAAACTTCAAAGTTGCAAGAAGATTCAGACTTCCAAAATTTCAAAGCTGTTATCAAATGTGAAGACCCGAATGCAAATTTGTACTCTTTCGTTGGCAGCCTTGAGCTTGAAGATCAACAGTATCCTCTTGCACCTCAGCAACTACTGCTTAGGGACTCAAAGTTGAGGAATACAGATTTTATCTATGGCGTGGCAGTCTTCACAGGACATGATACGAAGGTTATGCAGAATTCAACAGATCCTCCATCCAAGAGAAGCAAAGTTGAGAGGCAAATGGATAAGATAATCTACTTCCTGTTCCTTGTCTTGTTTTTCATTTCTTTTATTGGGTCCATTTTCTTTGGGATTGAAACAAGGGAAGATCTACATAATGGAAAAATGAAGAGGTGGTACCTTAGACCGGATAAAACCACAATCTACTATGATCCAAAGAAAGCACCAATTGCAGCAATTTTGCACTTTTGGACTGCACTTATGCTATATAGTTACTTGATTCCAATTTCTTTGTATGTCTCCATTGAAATTGTCAAAGTTCTTCAAAGCATTTTCATCAACCAGGATGTGAACATGTATTATGAGGAAACTGACCAGCCAGCACGTGCTCGAACTTCAAATTTGAATGAAGAATTAGGCCAAGTTGACACCATACTTTCAGACAAAACAGGAACTTTGACTTGCAATTCTATGGAATTTATCAAGTGCTCTATTGCTGGGGTTGCCTATGGACGAGGTGTTGCAGAAGTTGAGAGAGCTATGGCCCGGAGAAAAGGATTACCTTTAGGTCAAGAGTCGACAGAAGATGACAATGTTGCACTGATTTCTGAAGCAAAGTCATCAGTTAAAGGTTTTAACTTCATGGATGAAAGGATCATGAATGGAAATTGGGTCAAAGAACCCCATGCCAATGTAATACAGAACTTCCTGCGCTTGTTGGCATTATGCCATACTGCAATACCTGAAGTTGATGAAGAAACTGGTAAAGTTTCATATGAAGCTGAGTCACCAGATGAGGCAGCTTTTGTCATTGCAGCTAGAGAACTTGGATTTGAGTTTTACGAAAGGACACAAACAACTATTTCACTGCATGAATTCAATCCCATATCAGGCAAGACAACTGAAAGGTCCTACAAACTTTTAAATATATTAGAGTTTAATAGTGCAAGAAAGAGGATGTCTGTAATTGTGAGAGATGAGGAGGGGAAGCTACTACTACATAGCAAAGGCGCTGACAGTGTGATGTTTGAACGTCTTGCAAACAATGGAAGGGAGTTTGAAGAGAAGACAAAGCAGCACATTAATGAATATGCTGATGCTGGTTTGAGGACCTTGATACTTGCATATCGTGAACTCAATGAGGAAGAGTACAATCTATTTAATAAAGAATTCATGGAAGCTAAGAACACAGTGAGTGCAGATCAGGAGCAGATTGTAGAGGAAATATCAGAAAAGATTGAGAAGGATTTAATTCTTCTTGGTGCTACTGCAGTTGAAGACAAACTTCAAAATGGGGTTCCTGAATGCATTGACAAGCTAGCACAGGCAGGCATTAAGCTATGGGTTTTGACTGGTGATAAAATGGAGACAGCGATCAATATTGGATTTGCTTGTAGTTTACTCAGACAAGGAATGAAGCAAGTTATTATTAGCTCAGACACTCCGGAAACCAAATCACTGGAGAAAGCGGAGGACAAGTCTGCTGCTGCAGTGGAAGTGAAGGCAAGTGTTCTTCATCAATTGATGGAAGGAAAGGCATTACTTGCTGCATCTGATGAAAACTCTGAGGCATTAGCTCTGATCATTGATGGAGGGTCTCTCACTTATGTGCTAGAAGATGATGTAAAGGACTTGTTTCTTGATCTAGCTGTTGGCTGTGCATCTGTTATATGCTGTCGGTCATCTCCCAAGCAGAAAGCACTTGTTACTAGACTAGTGAAGGGTAAAACTGGTAGTACAACTCTAGCAATTGGTGATGGGGCAAATGATGTTGGAATGCTCCAAGAAGCAGACATTGGGATTGGTATCAGTGGTGTCGAAGGAATGCAGGCAGTTATGTCAAGTGATGTTGCAATTGCCCAATTCCGGTTTCTAGAGCGTTTACTTCTTGTGCATGGACATTGGTGTTACAGAAGAATCTCATCAATGATCTGCTATTTCTTTTACAAGAATATTGCCTTTGGTTTCACTTTATTCTTCTATGAGATCTATGCCTCATTCTCAGGGCAAGCTGCATACAATGATTGGTTCCTGTCACTATATAATGTATTCTTCACTTCCCTTCCTGTAATTGCCTTGGGAGTATTTGACCAGGATGTCTCTGCTAAATTATGTCTCAAGTTTCCATTACTGTATCAAGAAGGTGTGCAAAATATCCTATTCAGCTGGAAACGAATCCTTGCTTGGGCATTCAATGGTGTCCTGAGTTCTATCATTATATTTTTCTTCTGCATCAAGGTGATGGAGCATCAGGCGTTCCGCAAAGGAGGGGAAGTTGTTGGGCTGGAAATTCTCGGAGCCACAATGTACACTTGTGTTGTGTGGGTGGTAAATTGCCAAATGGTATTATCCATCAGTTACTTCACTTACATCCAACATATATTCATCTGGGGTGGCATTCTTTTCTGGTACATATTCCTCTTGGCATATGGTGCCATGGATCCCTCCCTCTCAACCACTGCTTATAAGGTCTTCGTTGAAGCTTGTGCACCAGCACCATTGTACTGGCTCATCACTTTGCTTGTGCTTGTTGCTTCACTCCTTCCATATTTTGCTTATGCTGCGATCCAAATGCGGTTCTTCCCCTATGTTCCATCAAATGATACAGTGGATAAGAAATGA 3456 0.41 MAGGRRNRHHFSRIHAFTCGKASFKDDHSLIGGPGFLRLVYCNESERAEGSFQYYGDNYVRTTKYTLATFLPKSLFEQFRRVANFYFLVCAILSFSPVSPYSAVSNVVPLVVVVAATMGKEAVEDWRRKKQDIEMNNRRVKVHQGEGVFEHSKWKDLKVGDVVKVEKDEFFPADLILLSSNYDDAICYVETMNLDGETNLKLKQALEKTSKLQEDSDFQNFKAVIKCEDPNANLYSFVGSLELEDQQYPLAPQQLLLRDSKLRNTDFIYGVAVFTGHDTKVMQNSTDPPSKRSKVERQMDKIIYFLFLVLFFISFIGSIFFGIETREDLHNGKMKRWYLRPDKTTIYYDPKKAPIAAILHFWTALMLYSYLIPISLYVSIEIVKVLQSIFINQDVNMYYEETDQPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGVAYGRGVAEVERAMARRKGLPLGQESTEDDNVALISEAKSSVKGFNFMDERIMNGNWVKEPHANVIQNFLRLLALCHTAIPEVDEETGKVSYEAESPDEAAFVIAARELGFEFYERTQTTISLHEFNPISGKTTERSYKLLNILEFNSARKRMSVIVRDEEGKLLLHSKGADSVMFERLANNGREFEEKTKQHINEYADAGLRTLILAYRELNEEEYNLFNKEFMEAKNTVSADQEQIVEEISEKIEKDLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMKQVIISSDTPETKSLEKAEDKSAAAVEVKASVLHQLMEGKALLAASDENSEALALIIDGGSLTYVLEDDVKDLFLDLAVGCASVICCRSSPKQKALVTRLVKGKTGSTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDVAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFYEIYASFSGQAAYNDWFLSLYNVFFTSLPVIALGVFDQDVSAKLCLKFPLLYQEGVQNILFSWKRILAWAFNGVLSSIIIFFFCIKVMEHQAFRKGGEVVGLEILGATMYTCVVWVVNCQMVLSISYFTYIQHIFIWGGILFWYIFLLAYGAMDPSLSTTAYKVFVEACAPAPLYWLITLLVLVASLLPYFAYAAIQMRFFPYVPSNDTVDKK* 1152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0533 1151 Gene3D - 515 698 IPR023299 GO:0000166
Dod09g0533 1151 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 1141 - -
Dod09g0533 1151 SUPERFAMILY Calcium ATPase, transmembrane domain M 45 1140 IPR023298 -
Dod09g0533 1151 Gene3D - 699 902 IPR023214 -
Dod09g0533 1151 SUPERFAMILY HAD-like 419 917 IPR036412 -
Dod09g0533 1151 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 1 1141 - -
Dod09g0533 1151 Pfam Cation transport ATPase (P-type) 520 623 - -
Dod09g0533 1151 SFLD p-type atpase 408 913 IPR044492 -
Dod09g0533 1151 ProSitePatterns E1-E2 ATPases phosphorylation site. 426 432 IPR018303 -
Dod09g0533 1151 PRINTS P-type cation-transporting ATPase superfamily signature 748 758 - -
Dod09g0533 1151 PRINTS P-type cation-transporting ATPase superfamily signature 424 438 - -
Dod09g0533 1151 PRINTS P-type cation-transporting ATPase superfamily signature 862 881 - -
Dod09g0533 1151 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 480 700 IPR023299 GO:0000166
Dod09g0533 1151 SFLD Haloacid Dehalogenase 408 913 - -
Dod09g0533 1151 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 829 945 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Dod09g0533 1151 Pfam Phospholipid-translocating P-type ATPase C-terminal 890 1140 IPR032630 -
Dod09g0533 1151 Pfam Phospholipid-translocating ATPase N-terminal 40 105 IPR032631 -
Dod09g0533 1151 SUPERFAMILY Calcium ATPase, transduction domain A 141 284 IPR008250 -
Dod09g0533 1151 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 55 1141 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Dod09g0533 1151 CDD P-type_ATPase_APLT_Dnf-like 57 1022 - -
Dod09g0533 1151 Gene3D - 113 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0533 Dod-Chr9 8356072 8363475 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0533 10 1140 Primary Pumps ATPases AT3G25610 71.227 0.0 1741
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0533 K01530 K14802 gmx:100797039 1963.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1851 05 44034964 44041572 Dod09g0533 09 8356072 8363475 ECH
Dod09g0533 09 8356072 8363475 Dod09g0533 09 8356072 8363475 ECH