Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0523 ATGGGGTGCTCGTTCTCTGGTCTGAACGCCTTATACGACGCCGTTAGCGGGGGAGGGGACGTTTGGATCAACGAGAACCGCTTCCGCGTCGTGAGGCAGCTCGGGGAAGGTGGTTTCGCCTACGTTTACTTGGTCAAGGAAGTACCCAATGACTCTTCTGCTGGTGGCCTTGCCATCAAGCTCAAAAACCCCTCTCTTCTCTCCGATGATGGAACTTATGCTCTGAAAAAGGTACTTATTCAGAACAGTGAGCAGTTGGAGTTGGTGAGGGAGGAGATCCGTGTTTCATCGCTGTTCAGTCATCCAAGTCTGCTCCCACTTCTTGACCATGCAGTCATTTCAGTTAAGCCTACACAAGAGACGTCTTGGACCCATGAAGCATACTTGTTATTTCCTGTACATTTGGATGGAACGTTGCTAGACAATGCTCAAACAATGAAAGCCAAGAAGGAGTTTTATTCTACTTCAGATGTCCTTCAAATATTTCGGCAGCTTTGTGCAGGACTCGAGCATATGCATGGTTTAGATCCTCCGTATGCACATAATGATGTCAAACCGGGTAATATTCTCATAACACACAGAAAAGGACAACCTCCACTTGCCATACTGATGGATTTTGGCAGTGCTCGACCTGCCAGGAGGCAAATTCACTCCAGATCAGAGGCTTTGCAGTTGCAGGAGTGGGCATCTGAGCATTGCTCTGCCCCTTTCCGAGCACCTGAGCTGTGGGATTGCCCAAGCCATGCTGATATAGATGAGAGGACTGATATTTGGTCACTTGGATGTACGTTGTATGCAATCATGTATGGAGTATCTCCATTTGAGTATGCACTTGGAGAATCTGGTGGTAGCCTGCAATTAGCCGTGGTAAACGCTCAGGTCAAATGGCCAGCTGGACCAAAGCCTCCGTATCCAGAAGCTCTTCATCAGTTTGTGACTTGGATGCTTCAGCCTCAGGCTACTGTGCGGCCCCGAATAGATGACATCATTATCCATGTTGACAAGTTGATCGCTAAGTTCTCTCCTTGA 1029 0.482 MGCSFSGLNALYDAVSGGGDVWINENRFRVVRQLGEGGFAYVYLVKEVPNDSSAGGLAIKLKNPSLLSDDGTYALKKVLIQNSEQLELVREEIRVSSLFSHPSLLPLLDHAVISVKPTQETSWTHEAYLLFPVHLDGTLLDNAQTMKAKKEFYSTSDVLQIFRQLCAGLEHMHGLDPPYAHNDVKPGNILITHRKGQPPLAILMDFGSARPARRQIHSRSEALQLQEWASEHCSAPFRAPELWDCPSHADIDERTDIWSLGCTLYAIMYGVSPFEYALGESGGSLQLAVVNAQVKWPAGPKPPYPEALHQFVTWMLQPQATVRPRIDDIIIHVDKLIAKFSP* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0523 342 ProSitePatterns Serine/Threonine protein kinases active-site signature. 179 191 IPR008271 GO:0004672|GO:0006468
Dod09g0523 342 PANTHER SERINE/THREONINE-PROTEIN KINASE 16 1 341 - -
Dod09g0523 342 SMART serkin_6 28 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g0523 342 ProSiteProfiles Protein kinase domain profile. 28 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g0523 342 ProSitePatterns Protein kinases ATP-binding region signature. 34 60 IPR017441 GO:0005524
Dod09g0523 342 Gene3D Transferase(Phosphotransferase) domain 1 16 341 - -
Dod09g0523 342 SUPERFAMILY Protein kinase-like (PK-like) 20 332 IPR011009 -
Dod09g0523 342 CDD STKc_16 27 338 - -
Dod09g0523 342 Pfam Protein kinase domain 69 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g0523 342 PANTHER - 1 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0523 Dod-Chr9 8123920 8131165 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0523 33 332 EF-hand Containing Proteins AT4G04710 24.262 1.59e-13 69.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NAK Dod09g0523 Pkinase 2.2e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0523 K08856 - gmx:100803659 635.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod09g0523 09 8123920 8131165 Dod09g0523 09 8123920 8131165 ECH