Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0522 ATGAACAACAGCCCCTCAGATGAGAGGGATCCTGTATGCCAAAAGAAGAGAAAACCCACCAGCAGTGAGGGGTCCACCGCGGTGAGGACTTCAAGGAGAAGATTCTTGAGCAGCAGCAGCAGCAAGAACAACAAGGGTAGTGATGGTGGTGCTGTCTCCACCACGCTGAAGCTCTACGATGACCCTTGGAAGATCAAGAAGACGCTGACAGAGAGCGATCTCGGAATCCTGAGCAGGCTCCTTCTGGCCGCAGATTTGGTGAAGAAGCAGATCCTGCCCATGTTGGGCGTCCATCACGCGAGAGCAGCAGAGTCCGAGGAGGGAACCCCAGTCAGAGTCTGGGACATGGACACCAAATCCATGCACCAATTGGTCCTCAAGCGCTGGTCTTCATCAAAGAGCTATGTCCTTATTGGGAAGTGGAACCAGGATTTCGTGAGGAGGAGGGACCTCAAGAAAGGGGAGGAGATTGGATTCCACTGGGATCCTTATAACTGCGCCTTCAACTTCTGTGTTCTTTCACGGGCCGCGATATGA 537 0.5326 MNNSPSDERDPVCQKKRKPTSSEGSTAVRTSRRRFLSSSSSKNNKGSDGGAVSTTLKLYDDPWKIKKTLTESDLGILSRLLLAADLVKKQILPMLGVHHARAAESEEGTPVRVWDMDTKSMHQLVLKRWSSSKSYVLIGKWNQDFVRRRDLKKGEEIGFHWDPYNCAFNFCVLSRAAI* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0522 178 MobiDBLite consensus disorder prediction 1 51 - -
Dod09g0522 178 MobiDBLite consensus disorder prediction 18 51 - -
Dod09g0522 178 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 5 175 - -
Dod09g0522 178 Gene3D - 62 175 IPR015300 -
Dod09g0522 178 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 5 175 - -
Dod09g0522 178 SUPERFAMILY DNA-binding pseudobarrel domain 61 170 IPR015300 -
Dod09g0522 178 CDD B3_DNA 63 174 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0522 Dod-Chr9 8106661 8107197 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0522 65 160 RAV Transcription Factor Family AT1G50680 33.010 4.41e-06 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0522 - - pvu:PHAVU_009G204600g 263.462