Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0501 ATGCCTGGAGCTCCTTTCAACATGCAGTACACAAACTGCTGCAAGGGTGGTGTGCTAACATCTTGGGGGCAGGATCCGTCAGGTGCAGTCTCAGCATTTCAGATTGTTGTGGGGCTCTCTGGCACCTCCAACAAGACAGTTAAACTGCCCAAGAACTACAAATTACTTGGACCCGGACCAGGATATTCTTGCGGCCCTGCAAAGAAAGTGCCATCCACTGTCATCCCAACAGATGATCGAAGGAGAAAAACTCAAGCATTGATGTCCTGGAATGTAACATGTACTTATTCACAGTTTCTGGCATCCAAGAATCCAAGTTGTTGTGTTTCTTTGTCATCTTTCTACAGTGATAAAGTCACAGCTTGCCCAACTTGTGCTTGTGGTTGCCAGAATAATGACACCTGTGTCACGAAAGACTCAAAGATACTGCAAGAAGAAGATGGAGGAAGGACTAAGAAGAAGGATATCACACCAAAACCATTGTTACAGTGCACACACCACATGTGTCATGTCAGGGTGCACTGGCATGTGAAAGACAATTACCAAGATTATTGGAGGGTAAAGATTGCCATCATTAACTTCGACTTTAGGCTGAATTACTCGCTATGGAATCTTGTTGTTCAACATCCCAATCTCAACAATGTCACCCAAGTGTATAGCTTTGAGTATATGCCACTTCTTCCCTACCAATCCATAAATGACACAGGCATGTTCTATGGCTTGAAATATTACAATGATCTGTTGATGGAAGATGGGCCTAAAGGGAATGTGCAGTCTGAGGTGCTCATGAAGAAGGACAAGAACACATTTACCCTCAAGGAGGGTTGGGCATTTCCCAGGAGGGTCTACTTCAATGGTGATGAATGTATGCTGCCACCTCCTGATTCATACCCTTTCTTGCCAAACTCTGCTCATAGGCTACCAACTAGTATTTCATTGATGGCAGCCTATGCCATTTTTGCATCTTTTTTCCATTTGGTTTTGATTCTTTTGTGA 996 0.4378 MPGAPFNMQYTNCCKGGVLTSWGQDPSGAVSAFQIVVGLSGTSNKTVKLPKNYKLLGPGPGYSCGPAKKVPSTVIPTDDRRRKTQALMSWNVTCTYSQFLASKNPSCCVSLSSFYSDKVTACPTCACGCQNNDTCVTKDSKILQEEDGGRTKKKDITPKPLLQCTHHMCHVRVHWHVKDNYQDYWRVKIAIINFDFRLNYSLWNLVVQHPNLNNVTQVYSFEYMPLLPYQSINDTGMFYGLKYYNDLLMEDGPKGNVQSEVLMKKDKNTFTLKEGWAFPRRVYFNGDECMLPPPDSYPFLPNSAHRLPTSISLMAAYAIFASFFHLVLILL* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0501 331 PIRSF COBRA 1 330 IPR006918 GO:0010215|GO:0031225
Dod09g0501 331 Pfam COBRA-like protein 2 97 IPR006918 GO:0010215|GO:0031225
Dod09g0501 331 PANTHER PROTEIN COBRA 1 330 IPR006918 GO:0010215|GO:0031225
Dod09g0501 331 PANTHER COBRA-LIKE PROTEIN 1 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0501 Dod-Chr9 7616274 7617794 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0501 1 316 COBRA Gene Family AT5G60920 60.938 5.98e-153 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0501 - - gmx:100813134 616.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod09g0501 09 7616274 7617794 Dod09g0501 09 7616274 7617794 ECH
Dod05g1811 05 43586471 43589928 Dod09g0501 09 7616274 7617794 PCT