Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0476 ATGCGAGTTCTTCTACATCATACCCCATTACCACCCACAGCGGATCTACCCACCTGCAACCGCCCATCCGCTACTAGTCACCCCCTACCACCCACTGGTCACCCCGTGCTTCCTGCCGGAAAGATGAAAGGCAATCCAAAAAGAGAAGCAAACGTGTTAAATGACCACCATGAAGATTTAGAGCTACCCTTGTTTGACATGTCCATAATTACTTCTGCAACCAATAATTTTTCAATTGACAACATACTGGGCATAGGTGGTTTTGGATCGGTTTATAAGGGTATTTTAGAAGATGGAAGAGAAATAGCTATCAAAAGGTTATCAAAGAATTCAAGTCAAGGACTTCAAGAGTTCAAAAATGAAGTTATGCATATAACCAGGCTTCAGCACAAAAATTTAGTGAAACTACTAGGGTGCTGCATTCAAGCAGAAGAAAGATTGCTGATTTATGAATTTATGCCCAACAAAAGCTTAGACTTTCACATATTTGGTTTGATTCCAAAAAAAACTTATGCATTATTTAATTCACTTGCAATTATATTCTCATTTAGTGAATGA 558 0.3871 MRVLLHHTPLPPTADLPTCNRPSATSHPLPPTGHPVLPAGKMKGNPKREANVLNDHHEDLELPLFDMSIITSATNNFSIDNILGIGGFGSVYKGILEDGREIAIKRLSKNSSQGLQEFKNEVMHITRLQHKNLVKLLGCCIQAEERLLIYEFMPNKSLDFHIFGLIPKKTYALFNSLAIIFSFSE* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0476 185 ProSitePatterns Protein kinases ATP-binding region signature. 83 105 IPR017441 GO:0005524
Dod09g0476 185 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-1 42 170 - -
Dod09g0476 185 MobiDBLite consensus disorder prediction 1 33 - -
Dod09g0476 185 Gene3D Phosphorylase Kinase; domain 1 51 152 - -
Dod09g0476 185 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 42 170 - -
Dod09g0476 185 SUPERFAMILY Protein kinase-like (PK-like) 52 168 IPR011009 -
Dod09g0476 185 Pfam Protein tyrosine and serine/threonine kinase 79 159 IPR001245 GO:0004672|GO:0006468
Dod09g0476 185 ProSiteProfiles Protein kinase domain profile. 77 185 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0476 Dod-Chr9 7156015 7166251 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0476 51 163 Receptor kinase-like Gene Family AT4G04500 59.292 5.75e-39 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dod09g0476 PK_Tyr_Ser-Thr 5.3e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0476 - - ahf:112769704 189.504