Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0443 ATGATCAGTTTTGCTCAAAGAAAAAGGGAAACAAATAGCACAAGAGAAGGATCATTAATGTCACAGCAGGAAACAGATTCATGGAGCTTCCTGGTAGTCTGTTTCTTGGTCCTTTTCTTCTCAGGTAAATTTGTTGCTGGAGATTCATTGGAGACAGACAAGCAAGTTCTGCTGAAGCTGAAATCTTACTTGGACGATCAAACTCTTCTAGGTAGAGGAGGGTACATGAACTGGAGCATGAACAGCACAAATCCATGTGAGTGGTCAGGAATCTCTTGCAGCATCATCAAAGGGGCAGGTTTAAGGGTTGTAAGCATAGACCTCTCTTCAAGTTCCATAGCTGGTGAAGTATTCCAGAACTTCTCTTTGCTCACAGAGCTCACGCACCTTGACCTCTCTGTGAACACCCTATCTGGGGTGATTCCTGAGGACTTGAGGAGGTGCCAGAGCCTTGTGTACCTTAACCTCTCTCACAATTTTCTTGAGGGGATGCTGAATTTGACTGGCTTGACAAGGTTGCAGACACTGGACTTGTCCACGAACAGATTTGAAGGGGAGCTTGGGATGAATTTTCCTGCCATTTGTGACAGTTTGGTCACTTTGAATGTTTCAGACAATCACTTCACTGGTAGGATTGACAGTTGCTTTGATCAGTGCCTCAGATTGCAGTTCTTGGATTTGAGCACCAACAATCTGAGTGGTGGCATATGGTCTGGTTTTGCAAGACTAAAAGGGTTTTCAGTTTCAGAAAACTTTCTCAGTGGTGTTGTTCCTTCTCTTGCTTTTCCAGGGAATTGCAGCCTTGAAAAATTGGATCTTTCAGAGAATTGGTTTGGTGGTAAACCCCCCAAGGAGATTGCTAACTGCAAGGATTTAGTGAATCTCAATCTTCGTAGTAACAACTTTAATGGGGATGTTCCTGAAGAATTTGGATCCATTTCTGGTCTTCAATCATTGCTATTGGGGAACAACAGTTTTTCAAGAGATATTCCAGAGAACCTTTTGAGCTTGACCAACTTGTTTATCCTGGATCTAAGCAGGAACAGTTTTGGTGGTGATGTACAGAAGATATTTGGTAAATTCAAGCAAGTGAAGTTTCTTGTGCTCCATTCAAATTCTTACACTGGAGGGTTGCTCACATCAGGCATTTTCACATTGACGAACCTTTGGCGCCTAGACTTAAGCTACAACAATTTTTCAGGTTCTTTACCATCTGAAATCTCTCAAATGTCTGGTCTTATGTTCTTAACTTTGACATACAACCAGTTCAGTGGACCTATTCCATCTGAATTAGGAAAACTGACTCGCCTTCAAATGCTTGACCTTGCCTTCAACAATTTCAGTGGACCAATCCCACCAAGCCTTGGAAACTTGAGTTCTCTATTGTGGCTAATGCTTGCAGATAATTCATTAACAGGAGAAATCCCACCAGAGTTGGGAAACTGCACAAGCTTGTTATGGTTGAATCTTGCAAATAACAAGCTCACTGGAAGCTTGCCCTCAGAGTTGGCAAAAATTGGAAGAAATGCCATTTCCACATTTGAATCAAATAAGAAAAACTTTATCAAAGTTGTTCCTGGCAATAGTGAGTGCTTGGCAATGAAGAGATGGATACCTGCTGATTATAGACCATTCAGCTTTGTGTCTAGTATCCTAACAAAGCAGAATTGTAGAACCCTTTGGGACAGAATTCTCAAAGGATATGGTATTCCCCAAACGAATACATGTGGTTCCCCTTCTAAAACATCTAACATAACCGGGTATGTTCAGCTTAGTGGGAACCAGCTCAGTGGTGGAATACCTTTGGAAATTTGTACTATGATGAAGTTCAGCATGTTGGATTTAGGGAATAACAATTTCACTGGAAAATTCCCAACACAGATGGGAAATTTGCCACTTATAACCTTGAACATGACAAGGAATAAGTTTTCAGGTGAAATTCCTAGTGAAATTGGCAAAATGAAATGCATGGAGGGTCTTGATTTGTCTTGGAACAACTTCTCAGGGACATTTCCCACAAGTTTGGTCAACTTGGTTGAGCTTACCATATTCAACATCTCATACAATCGTTTCATATCAGGTCTAGTGCCATCAAATGGACAATTTGTCGAATTTGCAAGAGATTCATATTTGGGTGACCCCCTCTTGATCCTCCCAAATTTCTTTGATAACAACCAGAATATTACCTCACACAAAGACCTGAAGAAGTCCACAAAACCCTCTCTATTTTTTGTGTTTCTGTCTCTAACACTGACTGTCTTAGTCTTTGGACTTCTTTTTCTTATAGTATATTTCTTGGTGAAGAGTCCACATGTGGAACCAGGATACCTCTTGAGCGATAAAAAAGTGGGGCATGATTCCAGCAGCAATGGATCCTCACCATGGTTATCTGATACTGTTAAGGTGTTTCACTTGAACAAGACAGTTTTCACACATGCTGATATCTTGGAGGCAACAGGCAACTTCAAAGAGGATCGAGTCATAGGAAAAGGTGGCTTTGGGACAGTGTACAAAGGGGTGTTTCCAGATGGGAGAGAAGTGGCAGTGAAGAAGCTCCAAAGGGAAGGAATTGAGGGTGAGAAAGAGTTCAGAGCTGAAATGGAGGTTCTGAGTGGTCATGGTTTTGGTTGGCCTCATCCAAACCTTGTTGACATCGAAGAGGCGCCTGGAAGTGGAGATTGA 2682 0.4172 MISFAQRKRETNSTREGSLMSQQETDSWSFLVVCFLVLFFSGKFVAGDSLETDKQVLLKLKSYLDDQTLLGRGGYMNWSMNSTNPCEWSGISCSIIKGAGLRVVSIDLSSSSIAGEVFQNFSLLTELTHLDLSVNTLSGVIPEDLRRCQSLVYLNLSHNFLEGMLNLTGLTRLQTLDLSTNRFEGELGMNFPAICDSLVTLNVSDNHFTGRIDSCFDQCLRLQFLDLSTNNLSGGIWSGFARLKGFSVSENFLSGVVPSLAFPGNCSLEKLDLSENWFGGKPPKEIANCKDLVNLNLRSNNFNGDVPEEFGSISGLQSLLLGNNSFSRDIPENLLSLTNLFILDLSRNSFGGDVQKIFGKFKQVKFLVLHSNSYTGGLLTSGIFTLTNLWRLDLSYNNFSGSLPSEISQMSGLMFLTLTYNQFSGPIPSELGKLTRLQMLDLAFNNFSGPIPPSLGNLSSLLWLMLADNSLTGEIPPELGNCTSLLWLNLANNKLTGSLPSELAKIGRNAISTFESNKKNFIKVVPGNSECLAMKRWIPADYRPFSFVSSILTKQNCRTLWDRILKGYGIPQTNTCGSPSKTSNITGYVQLSGNQLSGGIPLEICTMMKFSMLDLGNNNFTGKFPTQMGNLPLITLNMTRNKFSGEIPSEIGKMKCMEGLDLSWNNFSGTFPTSLVNLVELTIFNISYNRFISGLVPSNGQFVEFARDSYLGDPLLILPNFFDNNQNITSHKDLKKSTKPSLFFVFLSLTLTVLVFGLLFLIVYFLVKSPHVEPGYLLSDKKVGHDSSSNGSSPWLSDTVKVFHLNKTVFTHADILEATGNFKEDRVIGKGGFGTVYKGVFPDGREVAVKKLQREGIEGEKEFRAEMEVLSGHGFGWPHPNLVDIEEAPGSGD* 894
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0443 893 Pfam Leucine rich repeat N-terminal domain 51 94 IPR013210 -
Dod09g0443 893 Gene3D Phosphorylase Kinase; domain 1 787 886 - -
Dod09g0443 893 Gene3D Ribonuclease Inhibitor 355 449 IPR032675 -
Dod09g0443 893 Pfam Leucine rich repeat 126 183 IPR001611 GO:0005515
Dod09g0443 893 SUPERFAMILY RNI-like 102 303 - -
Dod09g0443 893 Gene3D Ribonuclease Inhibitor 262 354 IPR032675 -
Dod09g0443 893 SMART LRR_typ_2 458 482 IPR003591 -
Dod09g0443 893 SMART LRR_typ_2 434 457 IPR003591 -
Dod09g0443 893 SMART LRR_typ_2 386 410 IPR003591 -
Dod09g0443 893 SMART LRR_typ_2 124 148 IPR003591 -
Dod09g0443 893 SMART LRR_typ_2 313 337 IPR003591 -
Dod09g0443 893 ProSitePatterns Protein kinases ATP-binding region signature. 828 851 IPR017441 GO:0005524
Dod09g0443 893 ProSiteProfiles Protein kinase domain profile. 822 893 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g0443 893 SUPERFAMILY Protein kinase-like (PK-like) 803 887 IPR011009 -
Dod09g0443 893 Gene3D Ribonuclease Inhibitor 194 261 IPR032675 -
Dod09g0443 893 Gene3D Ribonuclease Inhibitor 49 193 IPR032675 -
Dod09g0443 893 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 22 884 - -
Dod09g0443 893 MobiDBLite consensus disorder prediction 1 20 - -
Dod09g0443 893 Gene3D Ribonuclease Inhibitor 634 716 IPR032675 -
Dod09g0443 893 Pfam Leucine Rich repeat 265 280 IPR001611 GO:0005515
Dod09g0443 893 SUPERFAMILY L domain-like 239 696 - -
Dod09g0443 893 Gene3D Ribonuclease Inhibitor 450 633 IPR032675 -
Dod09g0443 893 Gene3D - 515 574 - -
Dod09g0443 893 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 22 884 - -
Dod09g0443 893 ProSiteProfiles Leucine-rich repeat profile. 150 171 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0443 Dod-Chr9 6601886 6605294 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0443 49 870 Receptor kinase-like Gene Family AT4G39400 31.749 4.78e-88 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-2 Dod09g0443 LRR_8 3.8e-07 CL0022
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0443 - - gmx:100781769 1178.31