Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0440 ATGGGCTGTGTGAGCTCCAAGCAGGCGGTGTCGGTGACGCCTGCTATTGACCACTCGGGCGCATTTCGCGCCAATGCGGGCGATTCGGGAAGGAAGACGCTCGACTCGAACATCATCAACAGCAACAAGAAGGAGAAGAAGAAGAAGAAGAATCAGAGGAGTGACTCGGCCGGGGTGACTCGGAGCGAGTTGGGCGAGTCAGGGAGGACGAGTTCCAACGCGTGCGAATCGTTGAGCTTCAGGTTGGGCAACTTCCACAAGTACGCCGAGGGAGAACACGTGGCAGCCGGATGGCCAGCCTGGCTCAGCGCCGTCGCCGGCGAAGCCATTCACGGCTGGGTTCCCCTCCACACCGACGCCTTCGAAAAACTCGAGAAGATTGGGCAGGGTACCTATAGCAGCGTGTTTCGTGCGAGGGACCTTGAGACTGGGAAGATTGTGGCGTTAAAGAAGGTGCGGTTCGACAACTTCGAGCCAGAGAGCGTGAGGTTCATGGCGCGTGAGATAACGATCCTGAGGAGGCTCGATCACCCCAACATCGTGAAACTGCAGGGCCTAATCACTTCCAGGCTGTCCTGTAGCATATATCTTGTGTTCGAGTACATGGAACATGACATCACCGGACTGGTGTCCAGTCCTGATGTCAAATTCAGTGAACCCCAGATTAAGTGTTACATGAAGCAGTTGTTGTCTGGTCTTGAGCATTGTCACTCGCGGGGAGTGATGCACCGTGACATCAAGGGATCGAATCTCTTGGTGAACAATGAGGGGATATTGAAGGTGGCGGATTTTGGATTGGCGAATTTCGCCAGTTCTGGGCACAGGCATCCCCTCACCAGCCGAGTCGTCACTTTGTGGTACCGGCCGCCGGAGCTTCTGCTTGGCGCGACGGCTTATGGTCCTTCTGTGGATCTCTGGAGTGTTGGATGTGTTTTCGCGGAGCTGCTTGTTGGGAAGCCGATACTTCAGGGGAGAACAGAGGTTGAACAATTGCACAAAATCTTCAAGCTTTGTGGCTCCCCACCTGATGAATACTGGAAAAAGACTAGACTTCCTCATGCAACTTTGTTTAAGCCGCAGCAAACATATGATAGTTGCCTCCGAGAGTCCTTTAAAGATTTGCCTTCATCCAGTGTAAATCTGCTGCAAACTCTTCTTTCCATCGAACCGTACAAACGGGGGACTGCCACATCTGCTCTCTCATCAGAGTATTTCAAAACAAAACCTCTTGCATGTGACCCTTCAAGCTTGCCGACATATGCACCGAGCAAGGAAATTGATGCAAAACACAGAGAAGAGTCAAGGAAAAAGATTGGTGGGCGAGCTCGTGGAACTGAAACAAGAAAACCATCAAGAAAGGCATTAGGATTCAATAAACAAACTCCAGCAGAGGATTTGGCTAGTCAAACTCAAACTTCCAAAAATATCAATGGTAGATCTGTTTGCATCCTTAAAGAAGAGAAGACCAACACAGGTCAGGAGGAACAAAAGCCATCTACTGTTAAATTTGAAGATGCTTCCCATATGAAGAATGCATCTCAAGAAGATATCCCCTTTTCTGGACCATTACAAGTTTCGACATCAAGTGGCTTTGCATGGGCGAAAAGCCGTAAAGATGACGCTTCAATTCGATCCCATCGTCGAACTATTTCTAGAGGAAATATTTTCAATCCATTAGAAACTTCTACACTAAAATCCAGGAATAATTTGGACAACAGAAACCAGGAAAGTAAGGAGTTTTGTGGGGGACACACTAGCTCCAGGGGCACCGACCTCCTTGACATTTGTAAGCTTTCGATGCAGAATCAGTGGAGTAAGTTTGATCGCCCAGATTCATTTGATGCTTCTGATGAGTACCATTCGCAAGAACTCTCTATGGCACTTTATCATAGGGAAGATTCGATATCTAAGAGAAGCAACCTGAGTTTTCAGGATCAAGGAGAAAAGGTTGAATTTTCAGGACCCCTTCTATCTCAAATGCACACAGTTGACGAGCTCTTAGAAAAACATGAGCGTCACATCCGGCGCACTGTTCGAAGATCATGGTTTCAGAGAGCTAAGAAGCATGGGAAATAA 2076 0.4851 MGCVSSKQAVSVTPAIDHSGAFRANAGDSGRKTLDSNIINSNKKEKKKKKNQRSDSAGVTRSELGESGRTSSNACESLSFRLGNFHKYAEGEHVAAGWPAWLSAVAGEAIHGWVPLHTDAFEKLEKIGQGTYSSVFRARDLETGKIVALKKVRFDNFEPESVRFMAREITILRRLDHPNIVKLQGLITSRLSCSIYLVFEYMEHDITGLVSSPDVKFSEPQIKCYMKQLLSGLEHCHSRGVMHRDIKGSNLLVNNEGILKVADFGLANFASSGHRHPLTSRVVTLWYRPPELLLGATAYGPSVDLWSVGCVFAELLVGKPILQGRTEVEQLHKIFKLCGSPPDEYWKKTRLPHATLFKPQQTYDSCLRESFKDLPSSSVNLLQTLLSIEPYKRGTATSALSSEYFKTKPLACDPSSLPTYAPSKEIDAKHREESRKKIGGRARGTETRKPSRKALGFNKQTPAEDLASQTQTSKNINGRSVCILKEEKTNTGQEEQKPSTVKFEDASHMKNASQEDIPFSGPLQVSTSSGFAWAKSRKDDASIRSHRRTISRGNIFNPLETSTLKSRNNLDNRNQESKEFCGGHTSSRGTDLLDICKLSMQNQWSKFDRPDSFDASDEYHSQELSMALYHREDSISKRSNLSFQDQGEKVEFSGPLLSQMHTVDELLEKHERHIRRTVRRSWFQRAKKHGK* 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0440 691 Gene3D Phosphorylase Kinase; domain 1 108 203 - -
Dod09g0440 691 SMART serkin_6 121 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g0440 691 ProSiteProfiles Protein kinase domain profile. 121 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g0440 691 Pfam Protein kinase domain 121 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g0440 691 PANTHER CELL DIVISION PROTEIN KINASE 1 684 - -
Dod09g0440 691 MobiDBLite consensus disorder prediction 57 72 - -
Dod09g0440 691 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 1 684 - -
Dod09g0440 691 ProSitePatterns Serine/Threonine protein kinases active-site signature. 241 253 IPR008271 GO:0004672|GO:0006468
Dod09g0440 691 CDD STKc_CDK9_like 121 405 - -
Dod09g0440 691 MobiDBLite consensus disorder prediction 20 72 - -
Dod09g0440 691 ProSitePatterns Protein kinases ATP-binding region signature. 127 150 IPR017441 GO:0005524
Dod09g0440 691 MobiDBLite consensus disorder prediction 424 453 - -
Dod09g0440 691 SUPERFAMILY Protein kinase-like (PK-like) 114 411 IPR011009 -
Dod09g0440 691 Gene3D Transferase(Phosphotransferase) domain 1 204 442 - -
Dod09g0440 691 MobiDBLite consensus disorder prediction 416 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0440 Dod-Chr9 6519869 6525978 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0440 113 437 Core Cell Cycle Gene Families AT5G10270 51.026 9.17e-116 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Dod09g0440 Pkinase 4.2e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0440 - - gmx:100803328 1169.45