Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0439 ATGATAGGGCTTTGTTCGTGGGTACAAGTTTTTGATTGTTGCTTCTCCACGGATGTCTTGGAAGAAGAAGAGTACAAAGACTATATTGGAGGCATTGTAGCTCAACTACAAGATCACTTTCCAGATGCTTCTATCATGGTGTTCAATTTCAGGGAAGGGGAAAGGCGCAGCCAAATTTCAGACGTATTGGCTCAGTATGACATGACAGTTATGGAGTACCCTCGGCAATACGAAGGTTGTCCACTTCTGCCTTTGGAGATGATCCACCACTTCCTGCGATCAAGTGAAAGCTGGTTGTCTTTGGAGGGGCAACAGAATGTGCTTTTGATGTACTGTGATAGGGGCGGGTGGCCAGTGTTGGCATTTATGCTAGCAGGTCTTTTATTGTTTCGGAAACAGTATAATGGGGAGCAGAAGACCCTTGAAATGGTCTACAAGCAAGCACCTAGGGAACTTTTACAATTTTTATCGCCTCTGAACCCACAACCTTCTCACTTAAGATATCTTCAGTATATTTACAGAAGAAATTTGGGTTCTGAGTGGCCTCCTTCGGAAACACCCCTATTTATGGATTGTCTGATTCTTAGAGACCTGCCACTATATGATGATGGAACGGGTTGCAGGCCTGTTGTACGGGTGTATGGTCCAGACCCTTCAAAACCTGCCAATAGAAGCTCTAAGCTTCTTTTCTCAACTTCTAAAAACAGAAAACTCATCCGCCACTACCAACAGGCAGAATGTATGCTCGTGAAAATTGATATCCATTGTCACGTTCAAGGGGATGTTGTTCTTGAATGTATACATTTAAGTGAAGATTTCGTTCGTGAGGAGATGATTTTCAGAGTCATGTTTCATACTGCATTTGTGCGGTCGAATATATTGATGTTGGGCCGTGATGATATCGATATTATATGGGATGCAAAGGAACAGTTACCTAAGGACTTCAGATCAGAGGTGCTTTTTTTGGACGCTGATGCTGTTATACCTAATCTAACCACAGTAATTGTGAGTGGAGATGAAAATGAGTCAGAAAGTGCATCACCTGATGAGTTCTATGAAGTGGAAGAGATCTTCAGCAATGCACTAGATGCACAAGAAGGCAAGGGGGAGTACGTTTCTAAAATTGTTCATGATAGTACAGTAGATGATGGAAGTCATAAAGACATTGGGAAAGAGTACTCGGATCCTTATACTTTTCAGGATTTTAAGTCAGATGATGGAAGTCACAAACAGGTTGGAAGGATGGATTCTGGTATTAATGCAGTGAAAGACATTACTATTGATGATGTCAAGTACAAGCTCGACGGGACAAAAGATTTAGATCCTCATGCTGTGAAAGACATAGCTGTGGATGAGGCAGAAATTAAATCAACTCCAGACATTGCTGTGGATGAAGGAGAAATTAAATCAACTCCCAGTGCAGTCACTTTTGATGGGATGAAAACTCTAGAAACAAAAGAAGTCACTGTGGATGTGCATGAGGAGTTGGCAGTTATGCAAAACAAATATGAAGATATCAATGGAACAGAAAAAGAATTAGGGTCCAAGGAAGGACAGCAGTATCATGATCTTTCTGGACCAAAATCTGATAAACCACATCCATCTACCGAAAAGAAGCATCTTTCTTCACACTCAAAACCAATTGGAGATACGGTTGCAACAAAGCAAAAGAATAAACCCAATGAAACACCCGGCTTTGAGGCAAAACAGGCGAAGCCAAATGCAACAACTAGGTGGATTCCTAGTAACAAGGGTTCTTATCAAGATTCAATGCATGTATTATATCCACATTCAAAGCCTCATAATCCAGCAGCTGCTTCGTCGAATGCTCTCTCTCCTAAGGAGAAAATGACAGTTGCCAAAGGAAGGTCGTCTTCTTTTGATTCTCATGGCACTGGAGCAGTTGCTTCTATAGATAAAACGAATGACTTGGAAAGTCATAAGAGGTACCTTTCAAAATCTGCAGACAGCATAACAGAATTAGACTCTCCACAATCAACGTTGCATTCCATTAAAGAGACATCTCTTGAACTAGCTACTCAAGCACCAACTCCAACTCCACCTCCACCTCCACCTCCACCCCCACCCCACCCCCACCCCACCCAACCCTCACCACCTCCACCTCCACCTCCACCCCCACCTCTGCTTGGAAGGCGACCACCTGCTTTGCCATTATCTGGTAGACTAAACGATAGGATAAATATACAACATACAACTTCTCCTCCGCCCCCTCCTCCTCCCCCTCCCTCTCTACCTCCAAATTCGTTTCCTGAGCAAAGTAGAGGGAGTTTCCTACCTCATCCCACTCCTTGGAAGTCTGTTTATTCGTCGATTGCTGTAGTTGCTCCTCCTCCTACCTCTCCATTTAAAACAAGTGCAATTACATCAAAAGCTTCTGAATTGCTTCCTGTAGTCTCCCTTCCCCATCCACAACCACCCCCTCTTTCTTCAAAATATGGAGTTCCATCCATTCCTCCTCCTCCTCCTCCCCCTCCTCTTCTTTCCACACATGAACCTTCCCTTCCTCCTCCCTCAACATCCCCATTTGCATCATTTCAAGCTCCACCTTCACCAAATTTAAGGAGTGATCCACCACGCCCACCCCCACCCCCACTCCCACCTTTACCATCGTTACTTGATTCACATAGAGTTTCATCTCCACCATCATCACCCCCACCTCCACCTCCACCTCCTTTAAGTAAATCTCAACCACCATCAGCACCTCCACCTCCTTTAAGAGAAGCTCAACGACCACCACCTCCCTCTTCCTTAAGTGGAGCTCCACCACCACCTCCTCCTCCACCTCCTTTTGGTAGGGCGCCACAACCTCTTCCGCCATCAAGTGGAGCACCACCTGCACCATCGCCGTCACCACTTCCTCCACAAAGTGGTGCACCATGTCCACCACCACCACCACCTCCACTTCCTCTATTAAGTGGAGCATCACCTACTTCAGTGTTTGGAACCCCTTCTCCCCGGCCTCCACCAACTAGGGGAGTACCACCACCACCACCGCCACCGCTTTCAATGCATGGAGCTCTGCCTCCTTTGCCACCTCCAATGCATGGAGCCCCACCTCCTCCACCACTTCCAATGCATGGAGCACCACCTCCTCCACCACTTCCAGGAGGCCGAGGCCCACCTCCGCCACCTCCAATGAATGGAGTACCACCTCCTCCACCACTTCCAGGAGGGCAAGGTACTCCTCCGCCACCTCCTCCTGGAGCTCGTGCTCCTGGTGCTCCATCTCCTCCTAGACTTCCAGGTGGTGCACCTCCACCACCTCCAGGTGGTGATGATCCAAGAGGGAGAGGGCGTGGACTTGCACGTCCTGCAGGGGCTAGTGCAATGGCAGCTCGGCGATCCTCCTTAAAGCCTTTACACTGGAGCAAGGTAACAAGGGCATTGCAAGGAAGCTTATGGGAAGAATTGCAAAGAAATGGAGAACCTCAAATTGCACAAGAGTTTGACGTTTCAGAGCTGGAGAAGCTTTTTTCTGCAAATGTTCCAAAACCTGCCGATTCTGGTGGTAAATCCGGAGGACAGCGCAAACCTGCTGGATCCAAAAGCGATAAAGTCCAATTGATTGATCTGAGGAGGGCCAATAATACTGAAATTATGCTCACGAAGGTTAAGATGCCACTTCCTGACATGATGGCTGCAGTGCTAGCCATGGACGAGTCAGTGTTAGATGTAGATCAGGTGGAAAATCTAATTAAATTTTGTCCAACCAAAGAGGAGATGGAACTTTTGAAGGGATACACTGGTGACCTGGAGACTTTGGGGAAGTGTGAACAGTATTTTTTGGAGCTGATGAAAGTGCCACGAGTGGAGTCAAAATTGAGAGTGTTTTGTTTCAAGATTCAATTTGGGTCTCAGATTGCAGAGTTTAAGAAGAGTTTAAACACTGTAAACTCTGCCTGTGATGAGGTCCGAAATTCAGCTAAACTCAAGGAAATTATGAAGAAAATTCTTTATTTGGGCAATACATTGAATCAAGGAACGGCAAGGGGATCTGCTGTTGGATTCAAGTTGGATAGTCTTTTAAAGCTCAGTGACACTCGTGCTTCTAACAGTAAAATGACACTCATGCATTATCTTTGCAAGGTCCTAGCTGAAAGGTCTCCTGAACAACTTGATTTTCACCTTGACCTTGTTTGGCTAGAAGCAGCCACAAAGATACAATTGAAGTCATTAGCAGAAGAAATGCAGGCAATCATCAAGGGATTAGAAAAGGTTAAACAGGAGCTTGCTGCATCTGAAAATGATGGCCCTGTATCTGATGTCTTCCGTAAGACATTGAAAGAATTCATTTCTGTCACCGAGTCTGAGGTGGCATCTGTAACAAACCTGTATTCTGTTGTGGGTAGAAATGCAGATGCACTTGCACTATATTTTGGTGAGGATCCTGCTCGTTGTCCATTTGAACAAGTTACTGCAACTCTGTTAAATTTCACAAGACTCTTTTTGAAAGCACATGAGGAAAATATCAAGCAAGCTGAGTTAGAGAAGAAGAAAGCTGAGAAAGAGGCTGAAATGGAGAAGGCTAAAGGCCTTAACCCAACAAAGAAGAGCGAAAAAGATAGAGAAGAAGCAAGCTGA 4602 0.4546 MIGLCSWVQVFDCCFSTDVLEEEEYKDYIGGIVAQLQDHFPDASIMVFNFREGERRSQISDVLAQYDMTVMEYPRQYEGCPLLPLEMIHHFLRSSESWLSLEGQQNVLLMYCDRGGWPVLAFMLAGLLLFRKQYNGEQKTLEMVYKQAPRELLQFLSPLNPQPSHLRYLQYIYRRNLGSEWPPSETPLFMDCLILRDLPLYDDGTGCRPVVRVYGPDPSKPANRSSKLLFSTSKNRKLIRHYQQAECMLVKIDIHCHVQGDVVLECIHLSEDFVREEMIFRVMFHTAFVRSNILMLGRDDIDIIWDAKEQLPKDFRSEVLFLDADAVIPNLTTVIVSGDENESESASPDEFYEVEEIFSNALDAQEGKGEYVSKIVHDSTVDDGSHKDIGKEYSDPYTFQDFKSDDGSHKQVGRMDSGINAVKDITIDDVKYKLDGTKDLDPHAVKDIAVDEAEIKSTPDIAVDEGEIKSTPSAVTFDGMKTLETKEVTVDVHEELAVMQNKYEDINGTEKELGSKEGQQYHDLSGPKSDKPHPSTEKKHLSSHSKPIGDTVATKQKNKPNETPGFEAKQAKPNATTRWIPSNKGSYQDSMHVLYPHSKPHNPAAASSNALSPKEKMTVAKGRSSSFDSHGTGAVASIDKTNDLESHKRYLSKSADSITELDSPQSTLHSIKETSLELATQAPTPTPPPPPPPPPPHPHPTQPSPPPPPPPPPPLLGRRPPALPLSGRLNDRINIQHTTSPPPPPPPPPSLPPNSFPEQSRGSFLPHPTPWKSVYSSIAVVAPPPTSPFKTSAITSKASELLPVVSLPHPQPPPLSSKYGVPSIPPPPPPPPLLSTHEPSLPPPSTSPFASFQAPPSPNLRSDPPRPPPPPLPPLPSLLDSHRVSSPPSSPPPPPPPPLSKSQPPSAPPPPLREAQRPPPPSSLSGAPPPPPPPPPFGRAPQPLPPSSGAPPAPSPSPLPPQSGAPCPPPPPPPLPLLSGASPTSVFGTPSPRPPPTRGVPPPPPPPLSMHGALPPLPPPMHGAPPPPPLPMHGAPPPPPLPGGRGPPPPPPMNGVPPPPPLPGGQGTPPPPPPGARAPGAPSPPRLPGGAPPPPPGGDDPRGRGRGLARPAGASAMAARRSSLKPLHWSKVTRALQGSLWEELQRNGEPQIAQEFDVSELEKLFSANVPKPADSGGKSGGQRKPAGSKSDKVQLIDLRRANNTEIMLTKVKMPLPDMMAAVLAMDESVLDVDQVENLIKFCPTKEEMELLKGYTGDLETLGKCEQYFLELMKVPRVESKLRVFCFKIQFGSQIAEFKKSLNTVNSACDEVRNSAKLKEIMKKILYLGNTLNQGTARGSAVGFKLDSLLKLSDTRASNSKMTLMHYLCKVLAERSPEQLDFHLDLVWLEAATKIQLKSLAEEMQAIIKGLEKVKQELAASENDGPVSDVFRKTLKEFISVTESEVASVTNLYSVVGRNADALALYFGEDPARCPFEQVTATLLNFTRLFLKAHEENIKQAELEKKKAEKEAEMEKAKGLNPTKKSEKDREEAS* 1534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0439 1533 Coils Coil 1396 1423 - -
Dod09g0439 1533 Pfam C2 domain of PTEN tumour-suppressor protein 184 321 IPR014020 -
Dod09g0439 1533 Gene3D Protein tyrosine phosphatase superfamily 6 191 IPR029021 -
Dod09g0439 1533 MobiDBLite consensus disorder prediction 738 755 - -
Dod09g0439 1533 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1114 1515 IPR015425 -
Dod09g0439 1533 SMART it6_source 471 1533 IPR015425 -
Dod09g0439 1533 MobiDBLite consensus disorder prediction 517 545 - -
Dod09g0439 1533 MobiDBLite consensus disorder prediction 641 655 - -
Dod09g0439 1533 MobiDBLite consensus disorder prediction 806 851 - -
Dod09g0439 1533 MobiDBLite consensus disorder prediction 1168 1193 - -
Dod09g0439 1533 ProSiteProfiles C2 tensin-type domain profile. 185 324 IPR014020 -
Dod09g0439 1533 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1069 1509 - -
Dod09g0439 1533 MobiDBLite consensus disorder prediction 1502 1533 - -
Dod09g0439 1533 MobiDBLite consensus disorder prediction 656 681 - -
Dod09g0439 1533 Pfam Formin Homology 2 Domain 1121 1489 IPR015425 -
Dod09g0439 1533 MobiDBLite consensus disorder prediction 622 636 - -
Dod09g0439 1533 MobiDBLite consensus disorder prediction 988 1100 - -
Dod09g0439 1533 MobiDBLite consensus disorder prediction 886 979 - -
Dod09g0439 1533 MobiDBLite consensus disorder prediction 804 1122 - -
Dod09g0439 1533 PRINTS Proline rich extensin signature 737 758 - -
Dod09g0439 1533 PRINTS Proline rich extensin signature 695 711 - -
Dod09g0439 1533 PRINTS Proline rich extensin signature 681 693 - -
Dod09g0439 1533 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 185 321 IPR035892 -
Dod09g0439 1533 PANTHER FORMIN-J 10 1527 - -
Dod09g0439 1533 MobiDBLite consensus disorder prediction 517 769 - -
Dod09g0439 1533 SMART PTEN_C2_2 183 1167 IPR014020 -
Dod09g0439 1533 Coils Coil 1490 1519 - -
Dod09g0439 1533 Gene3D - 192 321 - -
Dod09g0439 1533 MobiDBLite consensus disorder prediction 682 720 - -
Dod09g0439 1533 MobiDBLite consensus disorder prediction 858 877 - -
Dod09g0439 1533 MobiDBLite consensus disorder prediction 547 563 - -
Dod09g0439 1533 MobiDBLite consensus disorder prediction 575 589 - -
Dod09g0439 1533 Gene3D Formin, FH2 domain 1114 1501 IPR042201 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0439 Dod-Chr9 6494598 6507318 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0439 1 618 FH2 protein (formin) Gene Family AT5G07740 56.634 0.0 694
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0439 - - lang:109327684 957.207