Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0429 ATGGAGACTGCCATTAATATTGGCTTTTCCTGTAGTTTGCTTAGACAAGGAATGAAACAGATTATAATTCATTTGGACAGTCCAGAAATTCAAGCTTTGGAGAAGGTTGGAGACAAGATGGCTATTTCCAAGGCTTCAAGGGAAAGTGTCCACCGTCAGATATCAGATGGGGCTCAACAGCTTACTACATCCAGAGGGATCTCTCAGCTGGCATTTGCTCTGATTATTGATGGAAAATCACTTGCTTATGCTCTGGAGGATAATATTAAGAACATGTTCCTAGAGCTAGCAATTCGATGTGCATCCGTTATCTGCTGTCGCTCATCACCAAAGCAGAAAGCACTGGTTGCTAGACTGGTCAAATCTGGAACTGGTAAAACAACGCTGGCTATTGGTGATGGAGCCAATGATGTTGGAATGCTTCACGAAGCAGATATAGGGGTTGGAATCAGTGGTTTTGAAGGAATGCAGGCTGTCATGTCCAGTGACATTGCAATCGCGCAGTTCCGGTATTTGGAAAGATTACTTCTCGTACATGGTCACTGGTGTTACCGGAGGATGTCATCAATGATATGCTATTTTTTCTACAAGAATATCACATTTGGCTTCACTTTATTCTTGTATGAGGTGTATGCGTCATTCTCCGGACAGCCTGCATACAATGACTGGTTTTTGTCTCTATATAGTATCCTCTTTTCATCACTTCCTGTGATCGCCCTTGGGGTCCTTGACCAGGATGTATCTGCCAGGTACTGTCTGAAGTTTCCTATCCTATACCAAGAAGGCGTGCAAAACATCCTATTCCGCTGGCGTCGAATCCTCAGCTGGATGCTTAACGGATTCGTCTGTGCCATAATGATCTTCTTCTTGTGCATGGAAGCGATCGAGGTTCAGGCCTTTGACAAGGAAGGAAGAACTGCTGGGAGGGACATATTGGGAGCAACCATGTACACATGCGTGGTATGGGTTGTGAACTTGCAGATGGCACTTTCCATAAGATACTTCACCTTGATACAACACATCTTCATCTGGGGTTCCATTGCTGTGTGGTATCTCTTCCTCATGGTGTATGGAGCAATGCCTTCAAAGATCTCCACAACTGCTTACAAAGTCTTCATTGAGACTCTTGCTCCTTCTCCTTCCTTCTGGATTGTGACACTCTTTGTGGTGCCCTCAACACTCATACCATGCTTCTCATTCTCAGCTATTCAGATGAGGTTCTTTCCAATGTACCATGAAAGGGTACAGTGGATAAGGTATGAAAGGAACAAGACTAACAATGATCCTGAACACCGTGATATGTTTAGGCAAAAATCATTGCAGCTAACAAGTATGGGTTCATATGCACGTTTTGATGGAAACCATAGTACAGGTAGAACGACTAACCATAGATAG 1395 0.4373 METAINIGFSCSLLRQGMKQIIIHLDSPEIQALEKVGDKMAISKASRESVHRQISDGAQQLTTSRGISQLAFALIIDGKSLAYALEDNIKNMFLELAIRCASVICCRSSPKQKALVARLVKSGTGKTTLAIGDGANDVGMLHEADIGVGISGFEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRMSSMICYFFYKNITFGFTLFLYEVYASFSGQPAYNDWFLSLYSILFSSLPVIALGVLDQDVSARYCLKFPILYQEGVQNILFRWRRILSWMLNGFVCAIMIFFLCMEAIEVQAFDKEGRTAGRDILGATMYTCVVWVVNLQMALSIRYFTLIQHIFIWGSIAVWYLFLMVYGAMPSKISTTAYKVFIETLAPSPSFWIVTLFVVPSTLIPCFSFSAIQMRFFPMYHERVQWIRYERNKTNNDPEHRDMFRQKSLQLTSMGSYARFDGNHSTGRTTNHR* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0429 464 SUPERFAMILY Calcium ATPase, transmembrane domain M 23 409 IPR023298 -
Dod09g0429 464 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 1 416 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Dod09g0429 464 Pfam Phospholipid-translocating P-type ATPase C-terminal 159 409 IPR032630 -
Dod09g0429 464 Gene3D - 1 171 IPR023214 -
Dod09g0429 464 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 1 426 - -
Dod09g0429 464 SUPERFAMILY HAD-like 87 186 IPR036412 -
Dod09g0429 464 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 426 - -
Dod09g0429 464 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 102 213 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0429 Dod-Chr9 6397453 6400764 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0429 1 462 Primary Pumps ATPases AT1G68710 68.443 0.0 696
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0429 K01530 - gmx:100811892 746.888