Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0425 ATGTATCAAAAGAATATCCAAGACGTGCATAATCGCGCCTCTACAACTATGATTTCACAATACAATCATGTTCATCAAGGTTCTCCTCATGCTACGGGGATGACATCCTTCCCATATTACCCAATGAGTATATGCTTACAGCCTGGTGAGGTTCCAACAACTCATTCATGGCCATCATTTGGAAGTTCAAATCCATCTGAAGCAAAAATACATGAAGTCGATAGGAGAGAATTGGCATTAATGAAGTTTAGACAAAAAAGGAAAGAGCGGTGTTTTGATAAGAAAATTAGGTACGTCAATCGGAAACGAGTAGCCGAGAGGCGGCCTCGTGTGAGGGGACAGTTTGTTAGAAAGTTGAATGGTGCTAATGTGGATCTTAGTGGACAACCTGATGCTATTGGCTATGATGAAGATGATCAGAGCGCTATGGATTCCTCTCCTGAGGATGCTTGA 453 0.4194 MYQKNIQDVHNRASTTMISQYNHVHQGSPHATGMTSFPYYPMSICLQPGEVPTTHSWPSFGSSNPSEAKIHEVDRRELALMKFRQKRKERCFDKKIRYVNRKRVAERRPRVRGQFVRKLNGANVDLSGQPDAIGYDEDDQSAMDSSPEDA* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0425 150 PANTHER TWO-COMPONENT RESPONSE REGULATOR 3 131 IPR045279 GO:0009736
Dod09g0425 150 PANTHER RESPONSE REGULATOR AND TRANSCRIPTION FACTOR RR-A-TYPE FAMILY-RELATED 3 131 - -
Dod09g0425 150 MobiDBLite consensus disorder prediction 122 150 - -
Dod09g0425 150 ProSiteProfiles CCT domain profile. 76 118 IPR010402 GO:0005515
Dod09g0425 150 Pfam CCT motif 76 118 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0425 Dod-Chr9 6364292 6364744 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0425 14 149 Response Regulator Gene Family AT5G61380 49.677 8.77e-42 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Dod09g0425 CCT 1.6e-15 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0425 K12127 - gmx:100271889 243.817