Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0423 ATGGAGCCTGAGGAGGTTAATTTGAACAGAGAAATTGGTGGTGGTGGTGGTGGTGGGGGTAATGGTAAGAGTGGTGGTGATGGGTTCATTGATAGAAGTAAAGTGAGGATTTTGTTGTGTGATAATGATTCCAAGAGCTCTTCTGAGGTTTTTACTCTTCTTTTGAGATGCTCTTACCAAGTTACTTCAGCAAGGTCAGCAAGGCAGGTAATTGATGCGCTGAATGCAGAGGGGCAATATATAGATATCATACTAGCTGAACTTGACCTTCCAATGGGGAAAGGCATGAAGATGTTGAAGTATATAGCACGAGACAAAGAATTGCGCAGAATTCCTGTTATAATGATGTCCGCACAAGATGAGGCATCCGTTGTTGTAAAATGCTTGAAACTTGGAGCAGCAGACTATCTAGTGAAGCCTTTACGCACTAATGAACTATTAAATTTGTGGACGCACATGTGGAGAAGGAGGCGCATGCTTGGACTTGTTGAGAAGAACATACTGAGTTATGACTTTGATTTGGTGGCAACGGACCCTAGTGATGCCAATACAAACAGTACCACCTTATTCTCAGATGACACGGATGACAAGTCCAAGAGAAACACTAATCCAGAGACAGGAATGTCAATCCAGCAAGAGCAAGAGTCTACTATAGCCATTGCTTGCTGCTGTTGTTGA 678 0.4292 MEPEEVNLNREIGGGGGGGGNGKSGGDGFIDRSKVRILLCDNDSKSSSEVFTLLLRCSYQVTSARSARQVIDALNAEGQYIDIILAELDLPMGKGMKMLKYIARDKELRRIPVIMMSAQDEASVVVKCLKLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLVEKNILSYDFDLVATDPSDANTNSTTLFSDDTDDKSKRNTNPETGMSIQQEQESTIAIACCCC* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0423 225 Pfam Response regulator receiver domain 37 148 IPR001789 GO:0000160
Dod09g0423 225 ProSiteProfiles Response regulatory domain profile. 36 154 IPR001789 GO:0000160
Dod09g0423 225 SUPERFAMILY CheY-like 33 161 IPR011006 -
Dod09g0423 225 MobiDBLite consensus disorder prediction 185 212 - -
Dod09g0423 225 PANTHER TWO-COMPONENT RESPONSE REGULATOR 6 221 IPR045279 GO:0009736
Dod09g0423 225 MobiDBLite consensus disorder prediction 1 26 - -
Dod09g0423 225 Gene3D - 35 221 - -
Dod09g0423 225 SMART REC_2 35 150 IPR001789 GO:0000160
Dod09g0423 225 PANTHER RESPONSE REGULATOR AND TRANSCRIPTION FACTOR RR-A-TYPE FAMILY-RELATED 6 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0423 Dod-Chr9 6356562 6363195 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0423 25 221 Response Regulator Gene Family AT5G61380 79.695 2.12e-110 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Dod09g0423 Response_reg 2.3e-18 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0423 K12127 - gmx:100799728 373.629