Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0412 ATGGCGCTTTTGGGGCTTCTCTTGGTGGGATTTCTCTCCCAGCTGGGATCTTCTGTTTCTGCTTATTCAGGTGGTGGTGGTTGGATGAATGCTCATGCAACCTTCTATGGAGGGGGTGATGCCTCTGGCACAATGGGTGGAGCTTGTGGATACGGGAACCTGTACAGCCAAGGCTATGGGACTAACACAGCTGCTCTAAGCACAGCCTTGTTCAACAATGGCTTGAGCTGTGGGGCTTGTTTCGAGATAAGGTGTGTTAATGACAATAGGTGGTGCCTCCCAAGGTCAATTGTGGTCACTGCCACCAATTTCTGCCCACCAAACAATGCACTCCCAAATAATGCCGGTGGATGGTGCAACCCTCCCCTTCACCACTTTGATCTCTCTCAGCCTGTTTTCCAACAGATAGCTGCTCAGTACAGTGCAGGCATAGTGCCTGTTGCTTACAGAAGGGTACCTTGCCGAAAGAGAGGGGGCATCAGGTTCACCATCAATGGCCACTCTTACTTCAACCTAGTACTAATCACCAACGTTGGTGGTGCTGGTGATGTTCATGCGGTTTCCATCAAAGGTTCAAGAACCAATTGGCAACCAATGCCAAGGAACTGGGGTCAGAACTGGCAAAGCAACTCATACCTCAATGGACAAAGCCTCTCCTTCAAGATTACCACTAGTGATGGCCGCACATTGGTCTCTTACAATGTTGCACCTGCTGGCTGGTCCTTTGGCCAAACGTTCACAGGCCAACAATTCAACTAG 759 0.5007 MALLGLLLVGFLSQLGSSVSAYSGGGGWMNAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEIRCVNDNRWCLPRSIVVTATNFCPPNNALPNNAGGWCNPPLHHFDLSQPVFQQIAAQYSAGIVPVAYRRVPCRKRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTNWQPMPRNWGQNWQSNSYLNGQSLSFKITTSDGRTLVSYNVAPAGWSFGQTFTGQQFN* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0412 252 Gene3D - 159 251 IPR036749 -
Dod09g0412 252 PRINTS Expansin signature 85 96 IPR002963 GO:0009664
Dod09g0412 252 PRINTS Expansin signature 205 226 IPR002963 GO:0009664
Dod09g0412 252 PRINTS Expansin signature 234 250 IPR002963 GO:0009664
Dod09g0412 252 PRINTS Expansin signature 158 170 IPR002963 GO:0009664
Dod09g0412 252 PRINTS Expansin signature 97 107 IPR002963 GO:0009664
Dod09g0412 252 PRINTS Expansin signature 116 133 IPR002963 GO:0009664
Dod09g0412 252 PRINTS Expansin signature 170 191 IPR002963 GO:0009664
Dod09g0412 252 PRINTS Expansin signature 58 72 IPR002963 GO:0009664
Dod09g0412 252 SMART dpbb_1 63 149 IPR007112 -
Dod09g0412 252 Pfam Expansin C-terminal domain 160 237 IPR007117 -
Dod09g0412 252 PANTHER EXPANSIN-A15 9 252 IPR002963 GO:0009664
Dod09g0412 252 SUPERFAMILY Barwin-like endoglucanases 27 177 IPR036908 -
Dod09g0412 252 PRINTS Expansin/Lol pI family signature 196 210 IPR007118 GO:0005576
Dod09g0412 252 PRINTS Expansin/Lol pI family signature 142 158 IPR007118 GO:0005576
Dod09g0412 252 PRINTS Expansin/Lol pI family signature 45 63 IPR007118 GO:0005576
Dod09g0412 252 PRINTS Expansin/Lol pI family signature 234 248 IPR007118 GO:0005576
Dod09g0412 252 PRINTS Expansin/Lol pI family signature 67 85 IPR007118 GO:0005576
Dod09g0412 252 PRINTS Expansin/Lol pI family signature 27 42 IPR007118 GO:0005576
Dod09g0412 252 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 46 159 IPR007112 -
Dod09g0412 252 Pfam Lytic transglycolase 63 149 IPR009009 -
Dod09g0412 252 PANTHER EXPANSIN 9 252 - -
Dod09g0412 252 Gene3D - 14 155 IPR036908 -
Dod09g0412 252 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 169 248 IPR007117 -
Dod09g0412 252 SUPERFAMILY PHL pollen allergen 156 248 IPR036749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0412 Dod-Chr9 6178907 6182199 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0412 1 251 Expansin Gene Family AT2G03090 79.681 7.67e-148 411
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0412 - K20628 nnu:104598100 451.44