Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0411 ATGGCCACCGTTACCACACAGGCTTCTGCAGCCACCATTTTCAGGCCATGTCCTTCAAAATCAAGGTTCCTCACTGGCTCTTCTGGTAAACTAAACAGGGAAGTGGCTATTAGGCCAATGGGGTCTCTCCCATCTGCCTCTTTGAAGGTTGAAGCCAGGAAAGGAGAGTGGTTGCCAGGCTTGCCGTCCCCAGCTTACCTCGATGGCAGTCTTCCTGGTGACAATGGTTTTGATCCTTTGGGGCTTGCTGAGGACCCAGAGAACTTGAAGTGGTATATTCAGGCTGAGCTTGTGAATTCACGCTGGGCCATGTTGGGTGTTGCAGGGATGTTGCTCCCTGAGGTCCTCACCAGCTTTGGGATCATCGATGTCCCTAAATGGTATGATGCTGGGAAAGCCGACTACTTTGCATCATCCTCAACACTCTTTGTGATTGAGTTCATCTTGTTCCATTACGTCGAGATCAGAAGATGGCAGGACATTAAGAACCCTGGGTGTGTCAACCAGGACCCCATATTCAAGCAATACAGCTTGCCCCCTCATGAGTGTGGATACCCTGGTAGCGTCTTCAACCCCTTGAACTTTGCACCAACTCTGGAGGCCAAGGAGAAGGAACTTGCCAATGGGAGATTGGCAATGCTGGCATTCTTGGGATTTATAGTTCAACACAACGTGACAGGTAAAGGCCCATTTGACAACCTCTTGCAGCACCTCTCAGACCCATGGCACAACACCATTATCCAAACACTGGGTGTCAAATAA 762 0.4987 MATVTTQASAATIFRPCPSKSRFLTGSSGKLNREVAIRPMGSLPSASLKVEARKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLKWYIQAELVNSRWAMLGVAGMLLPEVLTSFGIIDVPKWYDAGKADYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPHECGYPGSVFNPLNFAPTLEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHLSDPWHNTIIQTLGVK* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0411 253 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 250 - -
Dod09g0411 253 SUPERFAMILY Chlorophyll a-b binding protein 53 250 - -
Dod09g0411 253 Pfam Chlorophyll A-B binding protein 64 223 IPR022796 -
Dod09g0411 253 Gene3D Chlorophyll a/b binding protein domain 64 243 - -
Dod09g0411 253 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 250 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0411 Dod-Chr9 6174740 6176877 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0411 39 253 Chloroplast and Mitochondria Gene Families AT3G61470 50.446 2.72e-72 220
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0411 K08910 - gmx:100802922 472.626