Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0407 ATGGCCTGCTTAAAAAAGATACGGTCGAAGTTGAAAAAGATGATACAGGAGCTTACCGCCCTTTGCGATATCGATGCATGTGTAACCATTCATGGTCCAGAGGATAAGCGCCTTATGATTTGGGCACCTTCTATAGTGGCTAAAAATCGATTGCTACGATTTCAGAATATGAAAAGGCTTCAATGTCAACTTGCCAAGCTGAAAGAGGAGAATGATCAAATGGAAATGTCGATCTTCATGCACCAGATCTATAATGAAGGTAAACATTTATCTGATTCTACAGCCACTGATTTGGTGAAAGATGATGATAAGATGAATAGTGGTATTAATTACAATATAGTGAATAAAATAAGGCTAAATCCAAGACATACATATCTTGGTGATAAAGATGTGGTGTTGGTTCAAGATAATGACATATGTTATACTGTTAAAAGCAACTCAAGGGTGTTGCCTTCAGGTAACGTTGGAGGTCTCATTGGTGCAAAATGA 489 0.3763 MACLKKIRSKLKKMIQELTALCDIDACVTIHGPEDKRLMIWAPSIVAKNRLLRFQNMKRLQCQLAKLKEENDQMEMSIFMHQIYNEGKHLSDSTATDLVKDDDKMNSGINYNIVNKIRLNPRHTYLGDKDVVLVQDNDICYTVKSNSRVLPSGNVGGLIGAK* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0407 162 Coils Coil 57 77 - -
Dod09g0407 162 SUPERFAMILY SRF-like 3 61 IPR036879 GO:0003677|GO:0046983
Dod09g0407 162 Gene3D - 3 85 IPR036879 GO:0003677|GO:0046983
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-M-type Dod09g0407 SRF-TF 4.9e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0407 - K16551 gmx:106798339 79.3369