Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0406 ATGGAGAGTCAGCCACTCATCCGTTGGCCTTGGAACACTTACAATGAAACAGCACAAGGAAATAATCCACTTCCACTTACTTGCCAATCCTCTTCATATGATCAATGGCAATGCAGGGGTAATGCTAATGGTGGGTATCATGCAGTGGATAACTGGCTATATGAATTTCCCATGCCAGACAGCAATAATGTTGATGCCACCCCTTTTATGGAGTCTCATTATCCTGACATTTTTTATGAAATTCTTCCCACAGAACGTACACCAATAAGCATACAAGGGTATGACTTTGATGATGTTAAGAAAGTGCATTCTGTTTGGGATGAAATTGATGCTGGAAATGATTCAGATAAACTTGTGTTTTTATCATGCAACAATAATGGAGAAAGTGGCAAGGGAATTTGGAAATTAGAGTTGAAGGGTGAGACAAGTGGAGGAGAGAAAAGTGGCAGTGGCAATGGCAGAACCTTGTCAAGGAAGACCATTTCTCAGTGCTTCTACATGCCAATAGCACAGGCAGCCAGAAAGCTTAATGTGGGCCTGACACATTTGAAGAGGAGGTGTAGGGAGTTAGGGATTCAGAGGTGGCCCCACAGGAAGCTGATGAGCCTCCAAGCCTTGATAAAAAATGTGCAGGAGCAAGGACAAGAGGCCCAGGCAAGTGATGAAAAAATAAGGAATGCCATTGAGATATTGGAGAAAGAAAAGAAGCTGTTGGAGGAAATGCCGGATTTGCAACTTGAAGATAATACAAAAAGGCTAAGACAGGCATGCTTCAAAGCCAACTACAAGAAGAGGAAGCTCATGGTCATGAAGTTGGTGGAACCAGAGCCGTTTTCTTCTTCCCTCCTCATTGATGATGCAAGAAGTAATGACACATGGTTTGAAGAGCATCAACATGACCTTAAATATCTGTTGCCTGATCCTGATTCTGCTTTTAACACAATGTTCTAG 951 0.4248 MESQPLIRWPWNTYNETAQGNNPLPLTCQSSSYDQWQCRGNANGGYHAVDNWLYEFPMPDSNNVDATPFMESHYPDIFYEILPTERTPISIQGYDFDDVKKVHSVWDEIDAGNDSDKLVFLSCNNNGESGKGIWKLELKGETSGGEKSGSGNGRTLSRKTISQCFYMPIAQAARKLNVGLTHLKRRCRELGIQRWPHRKLMSLQALIKNVQEQGQEAQASDEKIRNAIEILEKEKKLLEEMPDLQLEDNTKRLRQACFKANYKKRKLMVMKLVEPEPFSSSLLIDDARSNDTWFEEHQHDLKYLLPDPDSAFNTMF* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0406 316 Coils Coil 200 241 - -
Dod09g0406 316 ProSiteProfiles RWP-RK domain profile. 140 223 IPR003035 -
Dod09g0406 316 PANTHER PROTEIN RKD1-RELATED 62 271 - -
Dod09g0406 316 Pfam RWP-RK domain 156 203 IPR003035 -
Dod09g0406 316 PANTHER PROTEIN RKD4 62 271 IPR044607 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0406 Dod-Chr9 6106178 6107947 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0406 148 266 AtRKD Transcription Factor Family AT1G18790 64.167 3.90e-49 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Dod09g0406 RWP-RK 6.8e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0406 - - gmx:100782238 258.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1741 05 42849412 42850155 Dod09g0406 09 6106178 6107947 PCT