Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0395 ATGATCATGGAGGGAGGTGATGATCTCCACCACCATCACCATCACCACCAACATCACCATCAACACAAACAAAGCTTCCCATTCCAACTCCTAGAGAAGAAAGAAGATCAACAAGAAGCAGCTTCATGCTCAACCTCGTCACCATACCCATCCCTAGCCATCTCCGCTGAACCAAGCACCTCCAACTCAAGCCGTTCCAACAACAACAACCAGCTCCTTCCTCCTCCTCCACCCTCCTCCGACAAAAAACCGCCACCAAAACGAACCTCCACAAAGGACCGGCACACAAAGGTGGACGGTCGAGGCCGTCGCATTCGTATGCCGGCCCTATGTGCTGCTAGAGTGTTCCAGCTCACGCGTGAGCTGGGACACAAATCCGATGGCGAAACCATAGAGTGGCTCCTCCAGCAGGCGGAGCCAGCCGTCATCGCTGCCACTGGAACCGGCACCATCCCCGCCAACTTCACGTCCCTTAACATATCATTAAGAAGTTCAGGTTCATCTATGTCGGTTCCATCTCAGCTAAGGTCTTCCTATTTCAACCCTAATTTCTCATTCCAAACAAGGAGAAGCTACTTCCCCGGAATTTCCTTGTCTTCAGAGAATTCCAACACTTCCAACACCACCAACATGTTCAATTTTCAGTCCAATAGCCTAATTAGCGCAGGCATGCTGCAAGCCAAGCACGAATTGCGCGATACCAGTGACACGCCAACGACCTTGGACTTGTCCGCAGAAGAGATTTTGGGAAGGAAACGGAGAAGCGCCGCCGAGCAAGACTTGTCGGCTTCGGCGGTGCAGCATCAAGTTGGGGGCTACCTGTTGCAATCAAGTAGCACCGGTTCGATTCCAGCGAGCCATGCTCAGGTTCCGGCTAATATATGGATGGTGGCGAATTCGAATAGCCAATTGGTGAGTGGTGATCCTGTGTGGACGTTCCCAGGGGTGAACAACAGTGGTTTGTACAGAGGCAATATGTCTAGTGGATTGCACTTCATGAATTTCCCTACCCCTATGGCCTTGTTGCCTGGACAACAATTAGGGCCTTCTGGAATCGGAGGCGGTGGCGGTGGCGGCGGCGGTGCGAATTTAAATGAAGGGCATTTGAGTATGCTCGCCGGGCTTAGCTCTTATCGTTCGATCGGCGGTTCGGAGTCTCAGGCAAGTGGCTCACAACAATCACATCATGGTGGTGGCAGCGATGATCGGCATGATAGCACTAGTCATCACTCATAG 1236 0.5218 MIMEGGDDLHHHHHHHQHHHQHKQSFPFQLLEKKEDQQEAASCSTSSPYPSLAISAEPSTSNSSRSNNNNQLLPPPPPSSDKKPPPKRTSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTSLNISLRSSGSSMSVPSQLRSSYFNPNFSFQTRRSYFPGISLSSENSNTSNTTNMFNFQSNSLISAGMLQAKHELRDTSDTPTTLDLSAEEILGRKRRSAAEQDLSASAVQHQVGGYLLQSSSTGSIPASHAQVPANIWMVANSNSQLVSGDPVWTFPGVNNSGLYRGNMSSGLHFMNFPTPMALLPGQQLGPSGIGGGGGGGGGANLNEGHLSMLAGLSSYRSIGGSESQASGSQQSHHGGGSDDRHDSTSHHS* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0395 411 MobiDBLite consensus disorder prediction 380 411 - -
Dod09g0395 411 MobiDBLite consensus disorder prediction 1 104 - -
Dod09g0395 411 MobiDBLite consensus disorder prediction 380 396 - -
Dod09g0395 411 ProSiteProfiles TCP domain profile. 91 145 IPR017887 -
Dod09g0395 411 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 15 410 IPR005333 GO:0003700
Dod09g0395 411 MobiDBLite consensus disorder prediction 25 39 - -
Dod09g0395 411 MobiDBLite consensus disorder prediction 397 411 - -
Dod09g0395 411 PANTHER TRANSCRIPTION FACTOR TCP14-LIKE 15 410 - -
Dod09g0395 411 MobiDBLite consensus disorder prediction 85 104 - -
Dod09g0395 411 MobiDBLite consensus disorder prediction 40 70 - -
Dod09g0395 411 Pfam TCP family transcription factor 89 261 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0395 Dod-Chr9 5859872 5862160 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0395 82 405 TCP Transcription Factor Family AT3G47620 45.122 1.98e-66 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Dod09g0395 TCP 3.6e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0395 - - pvu:PHAVU_003G190900g 427.172