Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0393 ATGAGATCCGAGGCTTTGGCTTCTGCGGTTGACCAGGTCAACGCGGTGGAAGAGACATCAAGAAAGAGGTCCTCTCCTGGTAAAAAGAACCGTGGCAAAGTCCCCAGGAGGGCTCGCAAGGCTGAAAGGGAGAAAATGAAGCGCGAACAGTTGAATGAACTCTTTCTTGATCTTGCCAATGCACTCGATCTTGATGAGCAGAACAACGGAAAAGCTTCTATATTGCGCGAAGCCACCAGACTCTTAAAGGACTTTTTCAGTCAGATCGAGTCCCTGAAGAAGGAGTATGTATCTTTATTGTCTGAAACTCATTATGTGACTTTGGAGAAAAATGAGGTGGAGGAGGAGAATTCTGCTCTAGAAGCTCAAATTGAGAAACTTCAAGGTGAGATAGAAGCAAGAGCAGCCCAGTCTAGACCAGACTTGAGTTTACCTCCTCATTTCAAACTTCATCCAGCCGGAAAAGGCGATAAATTTTCCGGGAGAGAGTCTCCAGTTGTCTACCATGGAACCTTCATTGCAGCAAGGACCTGCAGTTTTGGTTGTCCCCTTCCATCCCCATCATCAAACTGCTTTGTCAGCTCCTGA 588 0.466 MRSEALASAVDQVNAVEETSRKRSSPGKKNRGKVPRRARKAEREKMKREQLNELFLDLANALDLDEQNNGKASILREATRLLKDFFSQIESLKKEYVSLLSETHYVTLEKNEVEEENSALEAQIEKLQGEIEARAAQSRPDLSLPPHFKLHPAGKGDKFSGRESPVVYHGTFIAARTCSFGCPLPSPSSNCFVSS* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0393 195 Coils Coil 75 95 - -
Dod09g0393 195 PANTHER TRANSCRIPTION FACTOR BHLH47 1 161 - -
Dod09g0393 195 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 34 100 IPR036638 GO:0046983
Dod09g0393 195 MobiDBLite consensus disorder prediction 1 46 - -
Dod09g0393 195 PANTHER TRANSCRIPTION FACTOR BHLH47 1 161 - -
Dod09g0393 195 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 35 85 IPR011598 GO:0046983
Dod09g0393 195 Pfam Helix-loop-helix DNA-binding domain 36 83 IPR011598 GO:0046983
Dod09g0393 195 Gene3D - 31 96 IPR036638 GO:0046983
Dod09g0393 195 Coils Coil 110 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0393 Dod-Chr9 5817892 5820969 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0393 1 146 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G47640 57.823 1.96e-48 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0393 - - vun:114176257 177.563