Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0389 ATGGATTCTCTGAAGATCTTCAAAGGCAAAGGTTATTATGGCAAAGTAGAAGAACAGAATCACAACGACCTAGAAGATCAACCGCAACAACAACAACAACCTGAACGACACAAACCCTTCAAACCCTTAACCCTCACCATCTCCATCTTCGCCATCTTCTTCCTCACTGTAACCCTCGCCGTCGCCCTCGCCGCCCTCATCCACCACACCAACACCGAGCCCCCTGACTCCCCCGCCGAGTCCGTCCGAGCCGCCTGCTCCCTCACTCGCTTCCCCGACTCCTGCTTCTCCTCCATCTCCTCCTCCTCAACACCACCAGAACCGCCACCGCTCCGTTCCTCCCTCTCCGACGGTGGCGGACCCGCCGTTGTGGACTGCAGGGAGCAGGTGGACGACGCGGTGAGTCGACTCAACGACTCGATGTCGGCGGTGGAGGCGGCTGTCGGCAGGGGAAAGGGATTGGTGATGACGGGGGCGGAGATTGCGGACGTGAGGACGTGGGTGAGTGCGGCGGTTACGGACCAGCAGACCTGCCTAGACGGACTGGAGGAGATGGGATCGTCGTCAGCGGCGGAGGTGAAGAAGAAGATGGAGAGGTGCGGAGAGTACACCAGCAATAGCTTGGCCATTGTGGCCAACATGAAAGCCTTGTTCGAGCGGTTCCGTATGCCAATTCATTGA 681 0.5859 MDSLKIFKGKGYYGKVEEQNHNDLEDQPQQQQQPERHKPFKPLTLTISIFAIFFLTVTLAVALAALIHHTNTEPPDSPAESVRAACSLTRFPDSCFSSISSSSTPPEPPPLRSSLSDGGGPAVVDCREQVDDAVSRLNDSMSAVEAAVGRGKGLVMTGAEIADVRTWVSAAVTDQQTCLDGLEEMGSSSAAEVKKKMERCGEYTSNSLAIVANMKALFERFRMPIH* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0389 226 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 81 214 IPR035513 -
Dod09g0389 226 MobiDBLite consensus disorder prediction 97 122 - -
Dod09g0389 226 PANTHER PECTINESTERASE 1-LIKE 4 221 - -
Dod09g0389 226 Gene3D Invertase/pectin methylesterase inhibitor family protein 110 216 IPR035513 -
Dod09g0389 226 PANTHER PECTINESTERASE 4 221 - -
Dod09g0389 226 SMART PMEI_2 77 210 IPR006501 GO:0004857
Dod09g0389 226 CDD PMEI-like_3 122 214 - -
Dod09g0389 226 TIGRFAM PME_inhib: pectinesterase inhibitor domain 125 213 IPR006501 GO:0004857
Dod09g0389 226 Pfam Plant invertase/pectin methylesterase inhibitor 121 210 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0389 Dod-Chr9 5779716 5780458 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0389 1 226 Carbohydrate Esterase AT1G53840 32.075 2.96e-26 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0389 - - jre:108995452 170.244