Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0382 ATGGAACGTAGGAGCGGTTTCCCGCTTCTGGCACAACAATTCAGCGCGCTCCTAAGTAAGAACCTGTTGCTGTCGTGGCGGAACAGGAAGGCGACGCTGTTGCAGGTTCTGTCGCCGCTTTTGTTCATATTCCTGATATTCGCCATTGACAAGGCTATCAAGGCACAGTACTCCAACACCACTTACTACAAGAGCCTCACCGACCCTCCCTTTCACCCTTCCCCTCCCATCCCTCCCTGCGAGACCAAGTTCTTCGTCAAGCTCCCTTGCTATGACTTCCTCTGGAGCGGTGATGACAACCCAACGTTTCACACCGTTGTTGACCGTATCATGAAGAATAACCCCGGCAGGGTGATACCTCCCTCCAAGGTTAAATCCTTTAAAGATAAAGCCGCAGTGGATGAGTGGCTTTTTAATAATCCTATGCATTGTCCAGGGGCTTTACATTTCACGGAAAAAAATGCCACCGTCATCGGCTATGGTGTACAGACAAATTCAACTGCTGTTCAAAAGAGAGGGAAATATCAAGACCCCACTAATGCATTTCAAATCCCACTTCAGCTTGCGGCAGAGAGAGAAATTGCGAGATACCTGATTGGAGAGCCAAACTTCAGTTGGAATGTCTTTTTGAAGGAATATGCACACCCAGCCATGTCAGCTTTCTCTGCAGTGGGTTCAATAGGTCCAGCATTTTTCCTTGCAATTGCCATGTTTAATTTTGTTCTTCAGATGAGCTCTTTGGTGGCAGAAAAAGAGCTTAAACTTCGCCAGGCTATGACTATGATGGGCCTTTATGACTCTGCTTATTGGTTATCCTGGCTCATATGGGAGGCATTCATTACTTTCGTATCATCCCTTCTCATAGTTCTCTTTGGAATGATGTTTCAGCTTCGTTTCTTCTTGAAAAACAGCTTTCTGGTCCTATTCATTCTGTTCTTCCTGTTTGAACTCAATATGACTGGCTTTGCCTTCATGTTATCTGCTTTCATTCGCAAGTCATCTTCCGCAACAACGCTGGGCTTCTTCATATATATTATTGGCTTTGTTACTCAGCTCGTTGTACAAGCAGGATTTCCTTATACAACAAGCATCTCCAAGACTTTCCGAACTATCTGGTCATTCTTCCCGCCTAATACTTTTGCTCAAGCTCTACAGATGCTTTCAGATGAGGTTGCAACTCCTGAAGATCATGGTATTAGCTGGAGTAAACGGGGACAATGCCCTAGTGAGGACGATGACTGTGTGATAACAATTAATGATATTTATAAATGGCTGCTGGCTACATTCTTTCTGTGGTTTGTTCTGGCTATCTACTTTGACAACATTATCCCAAATGCATCTGGTGTGAGGAAATCCAAGATATACTTTCTTAATCCCAGTTATTGGATGGGAAAGAGGAGGCCAAAAAGTCAGAGTTGCTGCATATTTTCAGTCCCACATCAAGAGCATACTGCACCAGATGATGAAGATGTGCTTGAAGAAGAAAACACCGTAAAACGACAAATAACAGAAGGTGGCATTGATGTAAATGTTGCTGTTCAAATACGTGGCCTTACAAAGACATATCCTGGTGCATGTAAAATTGGTTGTTGCTGTAAATGTAAAAGAAGTACTCCTTACAATGCCGTTAAGGGTTTATGGGTGAACTTTGAAAAGGATCAGCTATTTTGTCTTTTAGGACCCAACGGAGCTGGAAAAACTACAGCTATTAATTGTTTGACAGGGATAACTCCAGTAACTGATGGAGATGCATTGATTTATGGATGCTCCATCCGGAGCTCCACTGGCATGTCAAACATTCAAAAGCTTATAGGAGTATGCCCCCAGTTTGATATCCTATGGGATGCACTGTCTGGTGAAGAGCACCTTCAACTCTTTGCTACTATTAAAGGCCTTTCCCCAAGTTCTATCAACTCAATTATCCAGGCATCATTGGGAGAGGTGAGACTCACTGATGCAGCCAAAGTGAGAGCTGGAAGTTACAGTGGAGGAATGAAACGCCGTCTCAGTGTAGCAATTGCCCTTATCGGTGACCCCAAATTAGTTGTTTTGGATGAGCCAACTACTGGCATGGATCCAATAACAAGGAGACATGTGTGGGACATAATTGAAAATGCAAAAAAAGGGCGTGCCATTGTTCTTACGACACACTCTATGGAAGAAGCTGACATTCTAAGTGACCGCATAGGAATCATGGCGAAGGGAAGGCTTCGCTGCATTGGAACCTCAATCAGATTGAAATCACGCTTTGGTACTGGTTTTATTGCTAATATCAGCTTCAACGGGAGCAATGTTGAACGCAGTCCTCCCAATGGGGATGCAGTTTCTACGGTGCATCGCGAGGCTGTGAAGCAATTCTTTAAGAATCATTTAGATGTAGTGCCAAAGGAAGAAAACAACAACTTTCTAACTTTTGTCATACCTCATGACAGAGAGGGGTTCCTGACGAATTTTTTCGCGGAGCTCGAAGATAGAGAAGAAGAATTTGGCATATCTGACATCCAGCTTGGTCTGACAACTCTTGAAGAAGTCTTCCTGAGTATTGCAAAACAAGCAGAGCTAGAAAGTGCTGCAGCTGAAGGGAGCCTAGTCACTTTGACCTTAACATCTGGAGAGTCTGCACAGATTCCCATAGGAGCTAGATTTGTGGGGATTCCAGGGACAGAATCTGAAGAATACCCAACAGGGTTCATGGTGGAAGTACATTGGGAGCAAGATGATTCTGGTGCCTTATGTATTTCTGGCCACTCTGAGAAAGCTCCAGTTCCTTCTGGTGTTCAGCTATCATCATCCCCACCGGGAAGACACCGTCGGAATCTACGCCGGTCAGGATCAGTTCGCGGGGTTGTGATCGATCCCAGTCAAGTTAGTTCAGTCAATTTTCGGTGA 2889 0.4441 MERRSGFPLLAQQFSALLSKNLLLSWRNRKATLLQVLSPLLFIFLIFAIDKAIKAQYSNTTYYKSLTDPPFHPSPPIPPCETKFFVKLPCYDFLWSGDDNPTFHTVVDRIMKNNPGRVIPPSKVKSFKDKAAVDEWLFNNPMHCPGALHFTEKNATVIGYGVQTNSTAVQKRGKYQDPTNAFQIPLQLAAEREIARYLIGEPNFSWNVFLKEYAHPAMSAFSAVGSIGPAFFLAIAMFNFVLQMSSLVAEKELKLRQAMTMMGLYDSAYWLSWLIWEAFITFVSSLLIVLFGMMFQLRFFLKNSFLVLFILFFLFELNMTGFAFMLSAFIRKSSSATTLGFFIYIIGFVTQLVVQAGFPYTTSISKTFRTIWSFFPPNTFAQALQMLSDEVATPEDHGISWSKRGQCPSEDDDCVITINDIYKWLLATFFLWFVLAIYFDNIIPNASGVRKSKIYFLNPSYWMGKRRPKSQSCCIFSVPHQEHTAPDDEDVLEEENTVKRQITEGGIDVNVAVQIRGLTKTYPGACKIGCCCKCKRSTPYNAVKGLWVNFEKDQLFCLLGPNGAGKTTAINCLTGITPVTDGDALIYGCSIRSSTGMSNIQKLIGVCPQFDILWDALSGEEHLQLFATIKGLSPSSINSIIQASLGEVRLTDAAKVRAGSYSGGMKRRLSVAIALIGDPKLVVLDEPTTGMDPITRRHVWDIIENAKKGRAIVLTTHSMEEADILSDRIGIMAKGRLRCIGTSIRLKSRFGTGFIANISFNGSNVERSPPNGDAVSTVHREAVKQFFKNHLDVVPKEENNNFLTFVIPHDREGFLTNFFAELEDREEEFGISDIQLGLTTLEEVFLSIAKQAELESAAAEGSLVTLTLTSGESAQIPIGARFVGIPGTESEEYPTGFMVEVHWEQDDSGALCISGHSEKAPVPSGVQLSSSPPGRHRRNLRRSGSVRGVVIDPSQVSSVNFR* 963
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0382 962 Gene3D - 506 758 IPR027417 -
Dod09g0382 962 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 513 759 IPR003439 GO:0005524
Dod09g0382 962 SMART AAA_5 552 736 IPR003593 -
Dod09g0382 962 ProSitePatterns ABC transporters family signature. 661 675 IPR017871 GO:0005524
Dod09g0382 962 Pfam ABC-2 family transporter protein 30 438 - -
Dod09g0382 962 CDD ABC_subfamily_A 513 747 - -
Dod09g0382 962 MobiDBLite consensus disorder prediction 919 947 - -
Dod09g0382 962 Pfam ABC transporter 545 688 IPR003439 GO:0005524
Dod09g0382 962 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 7 929 IPR026082 GO:0016021|GO:0055085|GO:0140359
Dod09g0382 962 PANTHER ABC TRANSPORTER A FAMILY MEMBER 1-RELATED 7 929 - -
Dod09g0382 962 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 538 749 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0382 Dod-Chr9 5642421 5649185 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0382 491 758 Calmodulin-binding Proteins AT2G36910 19.636 1.96e-08 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0382 - - gmx:100786538 1566.98