Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0370 ATGCAAATGGGTCCTGTGGCTTGGGTTGTGTTGGTGATTTCCAACACTTTTTTCTGCCATTCCTCTCTTGCTCTCACACAAGATGGTATCACGTTGTTGGAAATCAAAAGTACTTTGAATGACACAAGGAGTTTTCTCAGCGATTGGCAACATTCTAATGAGACTCACTGTACATGGATTGGCATCACCTGTTATCCAGGGGAAAAACAACGAGTTCGCTCAATAAATCTGCCTCACATGCAACTGGGGGGAATTATTTCTCCCAGCATTGGTAAGCTCAGTAAACTGCGGAGACTGGCACTTCATCAGAATGGCTTACATGGAATTATTCCTAATGAAATTATCATGTGTACTGAGCTAAGAGCACTGTACTTGAGGGGTAATTATTTTCAAGGAGGCATCCCATCAGATATTGGAAATCTACTGCATTTAAAGATACTGGATTTATCAAGCAACTCATTAAAGGGTGCTATACCTTCATCCATTGGACAGCTCACACATTTGCAACTTCTGAACTTGTCAACCAATTTCTTTTCTGGCGAAATCCCTGGTGTTGGAGTACTAGGAACCTTTGGGAAAAACGTGTTTATTGGCAATTTAGATCTTTGTGGGCGGCAAGTTCAAAAACCATGCCAGACATCACTCGGCTTCCCTGTGGTTCTACCGCATGCTGAGAATGATGAAGATGCAGGCATGTCAATGCCTACCAAAAGATCTTCACATTATGTGAAGTGGGTGTTAATTGGTGCAATATCAACAATGGGCCTTGGACTTGTCTTTGTACTTTTATTACTCTGGATTTGTTTGCCATCAAAGAAGGAACGAGCTGCTAGGAGATACACAGAAGTGAAGAAACAAGTCAATCCAGAATCAACCACAGTACTTATTACCTTCCATGGTGATCTGCCATATCCATCATCTGAGATCATTGAAAAGCTGGAGTCTCTTGACGAAGAGGATGTGGTGGGGTCTGGAGGATTTGGTACCGTTTCCCGAATGGTGATGAATGATTGTGGTACATTTGCTGTTAAGCGGATCAATAGAAGTCGTGAAGGGTCTGATCAGGGGTTTGAAAGGGAGCTGGAGATCTTAGGTAGCATCAAGCACATCAATTTAGTGAACCTGCGTGGTTACTGCAGGCTTCCTTCTACAAAGCTTCTAATCTATGATTATTTGGCGATGGGAAGCTTAGATAATCTCTTGCATGGAAATACTGAACAATCTCTGAACTGGAGTGCTCGCCTAAAGATAGCCCTTGGTTCTGCGCGCGGTTTGGCTTACTTGCACCATGACTGCAGCCCGAAAATTGTGCATCGTGACATAAAATCCAGCAACATCCTTCTTGATGAAAGCATGGAGCCTCATGTCTCTGATTTTGGTCTTGCAAAGCTTTTGGTTGATGAAGATGCACACGTTACAACAGTGGTTGCTGGCACATTTGGCTATTTGGCTCCAGAGTATCTACAAAGTGGGAGAGCAACTGAGAAGTCAGATGTATATAGCTTTGGAGTTCTATTGCTAGAACTTGCAACTGGAAAGAGACCAACAGACCCTTTGTTTCTAAAAAGAGGTCTAAATGTAGTTGGTTGGATGAACATGGTCCTGAGAGAGAACAGATTGGAAGATGTTGTAGACAAAAGATGCACCGATGCAGATTGGCCGTCCATTGAAGTGATCCTTGAGCTAGCAGCAAGTTGCACAGATGCGAATGCAGACGACCGTCCATCAATGAATCAGGTAGTGCAGTTGCTGGAACAAGAGGTTATGTCTCCTTGCCCAAGTGATTTCTATGAGTCACAATCGGATTGCTGTTAA 1815 0.4325 MQMGPVAWVVLVISNTFFCHSSLALTQDGITLLEIKSTLNDTRSFLSDWQHSNETHCTWIGITCYPGEKQRVRSINLPHMQLGGIISPSIGKLSKLRRLALHQNGLHGIIPNEIIMCTELRALYLRGNYFQGGIPSDIGNLLHLKILDLSSNSLKGAIPSSIGQLTHLQLLNLSTNFFSGEIPGVGVLGTFGKNVFIGNLDLCGRQVQKPCQTSLGFPVVLPHAENDEDAGMSMPTKRSSHYVKWVLIGAISTMGLGLVFVLLLLWICLPSKKERAARRYTEVKKQVNPESTTVLITFHGDLPYPSSEIIEKLESLDEEDVVGSGGFGTVSRMVMNDCGTFAVKRINRSREGSDQGFERELEILGSIKHINLVNLRGYCRLPSTKLLIYDYLAMGSLDNLLHGNTEQSLNWSARLKIALGSARGLAYLHHDCSPKIVHRDIKSSNILLDESMEPHVSDFGLAKLLVDEDAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELATGKRPTDPLFLKRGLNVVGWMNMVLRENRLEDVVDKRCTDADWPSIEVILELAASCTDANADDRPSMNQVVQLLEQEVMSPCPSDFYESQSDCC* 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0370 604 Gene3D Phosphorylase Kinase; domain 1 276 391 - -
Dod09g0370 604 PANTHER RECEPTOR-LIKE PROTEIN 55 2 602 - -
Dod09g0370 604 PANTHER LRR RECEPTOR-LIKE KINASE 2 602 - -
Dod09g0370 604 ProSiteProfiles Protein kinase domain profile. 316 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g0370 604 Gene3D Transferase(Phosphotransferase) domain 1 392 594 - -
Dod09g0370 604 ProSitePatterns Protein kinases ATP-binding region signature. 322 344 IPR017441 GO:0005524
Dod09g0370 604 ProSitePatterns Serine/Threonine protein kinases active-site signature. 436 448 IPR008271 GO:0004672|GO:0006468
Dod09g0370 604 Gene3D Ribonuclease Inhibitor 26 213 IPR032675 -
Dod09g0370 604 SUPERFAMILY L domain-like 26 205 - -
Dod09g0370 604 Pfam Leucine rich repeat N-terminal domain 27 64 IPR013210 -
Dod09g0370 604 SUPERFAMILY Protein kinase-like (PK-like) 296 585 IPR011009 -
Dod09g0370 604 Pfam Protein kinase domain 318 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g0370 604 Pfam Leucine Rich Repeat 143 163 IPR001611 GO:0005515
Dod09g0370 604 SMART serkin_6 316 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0370 Dod-Chr9 5491614 5497570 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0370 7 593 Receptor kinase-like Gene Family AT2G35620 48.211 0.0 536
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Dod09g0370 Pkinase 1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0370 - - gmx:100783363 1008.44