Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0368 ATGGGCATGGATTACTACAACATACTGAAAGTGAACCGAAACGCGAGTGACGACGACCTCAAGAAAGCGTACAAGAGGCTGGCCATGATCTGGCACCCCGACAAGAACCCCCTCAACAAGTCCGAAGCCGAGGCCAAATTCAAACGTATCTCCGAAGCCTACGATGTCCTCAGCGACCCTCAGAAGCGTCAGATCTACGATCTCTACGGCGAGGAGGCACTCAAGTCTGGCCAGTTCCCGTCACCATCCTCGTCTTCTTCTTCTTCTTCACGCGCTTACCAGAATGGTAACGGCCACAACCACTACCATAATAACCAACACCACCACCAGCAGCGCCAGAACCCTACGACGTCGTTTCGGTTCAATCCCCGCGATGCGGATGATATTTATAACGAGTTTTTTGGACCCGACGGCGCAGACGCCGGAGGCGGTGGTGGGAGGGGCGGCGCCGGGAGGAGGGACGGGTTCTTTAGGACGGCGAATGGGTTCGGTGGGCCCGGGAGGAAGGCGCCCGCTGTGGAGAACACGCTGCCGTGTAGCTTGGAGGATCTGTACAAGGGCGTCAAGAAGAAGATGAAGATCTCTAGGACTGTCTACGATGCTCTCGGGAAGTGCCGGAATGTGGAGGAGATTTTGACCATTGAGATAAAACCTGGCTGGAAGAAAGGAACGAAGGTTACTTTCCCTGAGAAGGGTAACCAGGAGCCTGGTGTCATCCCAGCAGATCTTATTTTTGTGATAGATGAGAAACCACATGTTCTTTATAGAAGGGATGGTAATGACTTGGTGATCCAGCAGGAGATAACTCTTCTGGAGGCTCTTACAGGCAAAACCTTGGACCTCACCACCTTGGATGGAAGGAGTCTCATGATCCCAATTACCGATATCGTCAAACCTGGTGCTGAGGTTGTTGTCCCTAATGAAGGAATGCCCTTGTCAAAAGAACCTGGGAGGAAGGGGAATTTGAGGATTAAGCTTGACGTCAAGTATCCTTCAAGGCTAACTCCAGAGGAGAAATCTGATCTGAGGAGAGTTTTGGCTGGAGTCTCGTAA 1053 0.5204 MGMDYYNILKVNRNASDDDLKKAYKRLAMIWHPDKNPLNKSEAEAKFKRISEAYDVLSDPQKRQIYDLYGEEALKSGQFPSPSSSSSSSSRAYQNGNGHNHYHNNQHHHQQRQNPTTSFRFNPRDADDIYNEFFGPDGADAGGGGGRGGAGRRDGFFRTANGFGGPGRKAPAVENTLPCSLEDLYKGVKKKMKISRTVYDALGKCRNVEEILTIEIKPGWKKGTKVTFPEKGNQEPGVIPADLIFVIDEKPHVLYRRDGNDLVIQQEITLLEALTGKTLDLTTLDGRSLMIPITDIVKPGAEVVVPNEGMPLSKEPGRKGNLRIKLDVKYPSRLTPEEKSDLRRVLAGVS* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0368 350 MobiDBLite consensus disorder prediction 77 101 - -
Dod09g0368 350 Gene3D DnaJ domain 1 89 IPR036869 -
Dod09g0368 350 Pfam DnaJ domain 4 67 IPR001623 -
Dod09g0368 350 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Dod09g0368 350 CDD DnaJ 4 59 IPR001623 -
Dod09g0368 350 Pfam DnaJ C terminal domain 174 331 IPR002939 -
Dod09g0368 350 SUPERFAMILY HSP40/DnaJ peptide-binding domain 174 252 IPR008971 GO:0006457|GO:0051082
Dod09g0368 350 CDD DnaJ_C 173 334 - -
Dod09g0368 350 PANTHER BNAA06G20720D PROTEIN 2 349 - -
Dod09g0368 350 SUPERFAMILY HSP40/DnaJ peptide-binding domain 255 340 IPR008971 GO:0006457|GO:0051082
Dod09g0368 350 SMART dnaj_3 3 62 IPR001623 -
Dod09g0368 350 Gene3D - 252 332 - -
Dod09g0368 350 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 2 349 - -
Dod09g0368 350 SUPERFAMILY Chaperone J-domain 3 86 IPR036869 -
Dod09g0368 350 MobiDBLite consensus disorder prediction 76 152 - -
Dod09g0368 350 Gene3D - 171 250 - -
Dod09g0368 350 PRINTS DnaJ domain signature 24 39 IPR001623 -
Dod09g0368 350 PRINTS DnaJ domain signature 6 24 IPR001623 -
Dod09g0368 350 PRINTS DnaJ domain signature 42 62 IPR001623 -
Dod09g0368 350 PRINTS DnaJ domain signature 62 81 IPR001623 -
Dod09g0368 350 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0368 Dod-Chr9 5445899 5451688 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0368 5 74 C2H2 Transcription Factor Family AT1G74250 37.838 4.50e-10 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0368 K09510 - gmx:100781572 528.48