Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0356 ATGTCTCAAGGATCTCCCCTTCCCAACACCGAACCCTCCAACCCTCACTCGCCGGAACCCGATTCCCAAAAGGACAACACAGAAACCGCCACCACAGCCGCCCCAACCGACGGCGACACCACCACAGCCACCGCCGAAGCTGCTCCTCCGCCTCCGGCGACCACCCGGAGCAACCGACCGTCCCGCGCGTGCACCATTCGCGCCGCTGCCCGCCTCCAATCGGCGTCGCAGCAGCAGGCGATCGAGCGCCGGAACAGGGCCGCCGCGAAGAGGGAGCAGCAACAGCGCCGCCGCCGCGAGGAGTCGCCGTCGCCTCCGTCATCGCCGCGGCAGCAGCAATGCAGCAAGATCGTGACACAGCTTGTGGAACCGCCACCGCCGTCGCAGCTGCCGCGCTGGAACCTCCGGTGCATGTGGGAGCTGGCTTCCGTGCTCAATTTCCTTCATCTGTTTAGGCCTCTTGTGAATATACAAATAGAATTCTCTGCTGAAGAGTTTGAGACAGCACTTCTTAACCCAAATGACACATTGGCTGATATTCACATGCCTTTGCTGAAGGCAATCCCTCCCATTACGCGAATGGCACTCACACGTGATACGTGGATAACTGTATTATGCAGAAAATTGAGAGATTGGTGGCATTGGGTTGCCGATGGGGATCTTCCAATTGTTGCCTCACATGGGGCGGAGGTTGAAGTATATAAATCACTTGATCCAGGGGTCCGTGTAGTCATCTTAAAAGCACTGTGCGACATCCGTGTTGAGCAAGAAGATATCCGAAGTTACATTGACAACTCACTCAAACATGGTGTTCAACTTTCAACATTTCGTAAGGAGCGTATTGGTGGTGATTCACATGGAATTTCTTATTGGTATGAAGATGACCCAATTATTGGTCATAGGTTATATCGGGAAATAAGAAAATCTGAAGTGGTTCAAGTGAAGAAAGGTAAACCAAGAGGTTCTCAGGTTCTTTCTAATACAACATACCAGTGGGAAGCAGTTGCTACCAATTTTGATGAATTTCAAGATGTTTCTGAGAAGCTTTTTTCAAGTAAAAACAGAACAGAGGCGTCTGTAGGGAAAAAGCTGAAGATAGATATGCTTCCTGAAATTGAGAAAGTTCACAAGAGAAAGGAAAGATTGCTGAAAAAGCAACACAGACAAGCTCTTCTTCTTGATAATTTCTTGGTTGTTGATGGGCTTGCCCCAGGGCGTTCACTTCGTGATAGGAAACCTGTTACCTACACTTTTGATGATTATGATCGGTCTATCAATGAGGCAATTAAGATAACCAAACGGAAACAACCATCCCCAGAACCTATACCCAGAAGAGAAGCAGGAGCAAAACATGAAGCTTTGACTAATGGTAAATGGAGTGGTCCTTCACATGCCGCTCAACATCTGAACTTTGGTATGCCATCTCCAAAATCACCTGACTTTGATGATGGAGACGAAGAGCATGATATTGACATGTTGGATCGAAGCAATCGACGAAGGCAGAGGCCTAAGCGTTATTCTGAGAAGGAGTTTGTCGAAGCAGTATCGGATCATGATGCGGACTTTGACAGTGATGATGATATTGTTGGAGAAGCTGTATATGATGAAGAATATCTCCGGAAACGTAAGCAGAGAAGGAAGTTTTCTAGTAGCTCTGCCTCTGAAGGAGATGAAGAATATCATTGGGATGAAGACAATGTCGAAGATGAAGAAGAAGAAGAAGAAGAAGAAGATGAAGACTCCTTGAGTATCAGTGAGGATAGTGACAAGCCCCGTAAATTCAAGCAATTGCCAGGCCGTACTAGGCGGGAAGCTAAACTCAGGTCTGTGGGTGATATTCACTCAGGTCTAAGACGAAGCAAGAGGTCAACTAGGAACCGCATAAATTACCGACAGTATGAGATGTCTGAGTCAGACACTGAGTTTGTTAAACCTGACAAGCCTAATGCATCAGATGATCACTCAGATCCCAGTGAGAATGGGGAGTTTATGGTGGAAAGTGAAGAATCAGATGGCAGTGATGATGAAGATCAGGAGATGAAAGTGGTTGAGCCTGTAACTTACCCTGCAGCAGAAGAAAATGAATATCCTGCAGCAGCAGAAGAAAACGAACATACTGCTGCAGTAGAAAACGAATTTCGTGCAGCAGAAGAAAACGAGAACGAAGATCCTGCTGTAGGAGAAGAAAACCAAAACCGGCCTCCTGAAAAATCAAGTAGCCCTCCGGGTCAAGAGGAAGCTGAGGGCATGAAAATGAGACGTTTCCTTGACTTGAATGAACTTGCCCCCAGCTCAGGTTTTGATGATGGTCCAACTCCAAATACAACAGCTAAAGATGAAGGAGGCAATGATGATTAG 2358 0.4733 MSQGSPLPNTEPSNPHSPEPDSQKDNTETATTAAPTDGDTTTATAEAAPPPPATTRSNRPSRACTIRAAARLQSASQQQAIERRNRAAAKREQQQRRRREESPSPPSSPRQQQCSKIVTQLVEPPPPSQLPRWNLRCMWELASVLNFLHLFRPLVNIQIEFSAEEFETALLNPNDTLADIHMPLLKAIPPITRMALTRDTWITVLCRKLRDWWHWVADGDLPIVASHGAEVEVYKSLDPGVRVVILKALCDIRVEQEDIRSYIDNSLKHGVQLSTFRKERIGGDSHGISYWYEDDPIIGHRLYREIRKSEVVQVKKGKPRGSQVLSNTTYQWEAVATNFDEFQDVSEKLFSSKNRTEASVGKKLKIDMLPEIEKVHKRKERLLKKQHRQALLLDNFLVVDGLAPGRSLRDRKPVTYTFDDYDRSINEAIKITKRKQPSPEPIPRREAGAKHEALTNGKWSGPSHAAQHLNFGMPSPKSPDFDDGDEEHDIDMLDRSNRRRQRPKRYSEKEFVEAVSDHDADFDSDDDIVGEAVYDEEYLRKRKQRRKFSSSSASEGDEEYHWDEDNVEDEEEEEEEEDEDSLSISEDSDKPRKFKQLPGRTRREAKLRSVGDIHSGLRRSKRSTRNRINYRQYEMSESDTEFVKPDKPNASDDHSDPSENGEFMVESEESDGSDDEDQEMKVVEPVTYPAAEENEYPAAAEENEHTAAVENEFRAAEENENEDPAVGEENQNRPPEKSSSPPGQEEAEGMKMRRFLDLNELAPSSGFDDGPTPNTTAKDEGGNDD* 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0356 785 MobiDBLite consensus disorder prediction 541 785 - -
Dod09g0356 785 Coils Coil 77 97 - -
Dod09g0356 785 MobiDBLite consensus disorder prediction 632 661 - -
Dod09g0356 785 MobiDBLite consensus disorder prediction 430 525 - -
Dod09g0356 785 MobiDBLite consensus disorder prediction 490 518 - -
Dod09g0356 785 PANTHER DDT DOMAIN-CONTAINING PROTEIN DDR4 32 782 - -
Dod09g0356 785 MobiDBLite consensus disorder prediction 585 619 - -
Dod09g0356 785 MobiDBLite consensus disorder prediction 1 43 - -
Dod09g0356 785 MobiDBLite consensus disorder prediction 541 557 - -
Dod09g0356 785 PANTHER REMODELING AND SPACING FACTOR 1 32 782 IPR028938 GO:0006355|GO:0031213
Dod09g0356 785 Pfam DDT domain 143 188 IPR018501 -
Dod09g0356 785 MobiDBLite consensus disorder prediction 1 115 - -
Dod09g0356 785 Coils Coil 699 719 - -
Dod09g0356 785 MobiDBLite consensus disorder prediction 430 452 - -
Dod09g0356 785 MobiDBLite consensus disorder prediction 705 730 - -
Dod09g0356 785 MobiDBLite consensus disorder prediction 558 584 - -
Dod09g0356 785 MobiDBLite consensus disorder prediction 84 104 - -
Dod09g0356 785 MobiDBLite consensus disorder prediction 662 678 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0356 Dod-Chr9 5323709 5331959 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Dod09g0356 DDT 4.5e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0356 - - ahf:112802596 1099.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1687 05 42152079 42162605 Dod09g0356 09 5323709 5331959 PCT